Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 24-761 |
| Cow position: | chr9:64119297-64120039 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 25-341 |
| Cow position: | chr9:3354615-3354290 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 28-773 |
| Cow position: | chr9:20309073-20308320 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 49-527 |
| Cow position: | chr9:28688186-28688687 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 49-673 |
| Cow position: | chr9:59425859-59426501 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 49-767 |
| Cow position: | chr9:44818277-44818976 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 51-773 |
| Cow position: | chr9:5514522-5515245 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 53-498 |
| Cow position: | chr9:13476795-13476326 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 58-773 |
| Cow position: | chr9:3566740-3566018 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 65-773 |
| Cow position: | chr9:9013217-9013922 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 93-764 |
| Cow position: | chr9:30487694-30488388 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 493 |
| Conread position: | 93-773 |
| Cow position: | chr9:42569041-42569731 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 268 |
| Conread position: | 99-771 |
| Cow position: | chr9:10321959-10322630 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-772 |
| Cow position: | chr9:59536246-59536923 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr9:4532642-4533319 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr9:7002933-7003627 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr9:9705710-9706370 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 99-773 |
| Cow position: | chr9:16175918-16176597 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr9:29028050-29027383 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr9:37162664-37161985 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 137 |
| Conread position: | 99-773 |
| Cow position: | chr9:37971059-37970368 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 99-773 |
| Cow position: | chr9:59174009-59173320 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr9:60277871-60277187 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-659 |
| Cow position: | chr9:4281923-4282487 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 103-773 |
| Cow position: | chr9:7061939-7061254 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 103-773 |
| Cow position: | chr9:22653719-22654400 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 456 |
| Conread position: | 103-773 |
| Cow position: | chr9:47002342-47003021 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 487 |
| Conread position: | 105-773 |
| Cow position: | chr9:18509647-18508985 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 105-773 |
| Cow position: | chr9:51182038-51181357 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 106-773 |
| Cow position: | chr9:25187259-25187932 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 109-757 |
| Cow position: | chr9:7039510-7040158 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 411 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 113-771 |
| Cow position: | chr9:45873502-45874160 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 499 |
| Conread position: | 115-247 |
| Cow position: | chr9:3156188-3156322 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 115-316 |
| Cow position: | chr9:1995749-1995545 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 115-762 |
| Cow position: | chr9:5004159-5004788 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 115-773 |
| Cow position: | chr9:30672533-30673194 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 115-773 |
| Cow position: | chr9:42309848-42310508 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 116-223 |
| Cow position: | chr9:31020988-31021098 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-771 |
| Cow position: | chr9:36724663-36725326 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 121-773 |
| Cow position: | chr9:27034853-27035510 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 127-771 |
| Cow position: | chr9:780633-779983 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 380 |
| Conread position: | 127-771 |
| Cow position: | chr9:51210853-51211506 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 445 |
| Conread position: | 130-773 |
| Cow position: | chr9:28021978-28022632 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 132-762 |
| Cow position: | chr9:6249487-6250117 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 140-750 |
| Cow position: | chr9:30826866-30827482 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 140-771 |
| Cow position: | chr9:1251810-1251171 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 154-762 |
| Cow position: | chr9:53702520-53701915 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 161-773 |
| Cow position: | chr9:31807781-31808405 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 163-773 |
| Cow position: | chr9:3543054-3543686 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 541 |
| Conread position: | 163-773 |
| Cow position: | chr9:43664042-43664625 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 22 |
| Conread position: | 168-771 |
| Cow position: | chr9:50790928-50791538 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 235 |
| Conread position: | 216-773 |
| Cow position: | chr9:2867692-2867156 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 236-773 |
| Cow position: | chr9:32969234-32969775 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 369 |
| Conread position: | 248-771 |
| Cow position: | chr9:3763307-3763827 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 157 |
| Conread position: | 249-773 |
| Cow position: | chr9:828825-828307 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 313-747 |
| Cow position: | chr9:25633647-25633203 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 380-724 |
| Cow position: | chr9:27782652-27782987 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 141, 61 |
| Conread position: | 380-773 |
| Cow position: | chr9:8401973-8402355 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 415-768 |
| Cow position: | chr9:2476235-2476581 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 461-773 |
| Cow position: | chr9:17305460-17305149 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 462-772 |
| Cow position: | chr9:26102568-26102264 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 462-773 |
| Cow position: | chr9:2498462-2498167 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 495-769 |
| Cow position: | chr9:13475246-13474966 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 496-771 |
| Cow position: | chr9:31065270-31065544 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 502-774 |
| Cow position: | chr9:1980831-1981102 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 537-770 |
| Cow position: | chr9:25903108-25903336 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 555-773 |
| Cow position: | chr9:4649982-4649766 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 36 |
Show alignments to all cow chromosomes.