Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               24-664
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               25-594
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               25-771
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               35-772
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               36-555
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               44-406
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               48-769
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               49-777
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               53-773
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               89-312
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               98-772
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               99-332
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               99-586
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               99-701
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-759
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-762
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               101-227
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               105-380
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 67
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 428
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               110-772
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 198
               

               Conread position:
               117-776
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 503
               

               Conread position:
               119-632
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 236
               

               Conread position:
               121-671
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               121-671
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 495
               

               Conread position:
               121-771
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 218
               

               Conread position:
               121-773
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               127-696
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 485
               

               Conread position:
               127-756
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 127
               

               Conread position:
               127-768
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 429
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 485
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 429
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 485
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 172
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 324
               

               Conread position:
               132-771
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 479
               

               Conread position:
               133-771
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 479
               

               Conread position:
               135-771
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 234
               

               Conread position:
               142-771
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 279
               

               Conread position:
               142-773
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 336
               

               Conread position:
               163-773
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 248
               

               Conread position:
               164-773
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 443
               

               Conread position:
               165-773
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 343
               

               Conread position:
               167-773
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               168-771
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 200
               

               Conread position:
               174-668
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               185-773
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 272
               

               Conread position:
               192-773
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 134
               

               Conread position:
               196-774
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               238-773
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 147
               

               Conread position:
               243-773
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               247-771
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 65
               

               Conread position:
               260-773
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 166
               

               Conread position:
               275-743
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               276-773
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               308-773
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               313-771
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 294
               

               Conread position:
               345-673
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               376-773
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 5
               

               Conread position:
               380-771
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 224
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               395-773
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 8
               

               Conread position:
               400-773
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 49
               

               Conread position:
               439-771
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               439-773
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 66
               

               Conread position:
               451-773
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 149
               

               Conread position:
               459-734
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 139
               

               Conread position:
               464-773
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               480-769
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 113
               

               Conread position:
               485-762
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               488-771
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               496-773
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               501-734
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               502-773
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               511-710
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               528-773
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               530-773
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               549-773
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               576-770
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               611-763
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               617-771
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.