Cow genome map
Conread name: | Lng1-LNG010059B05 |
Conread position: | 24-664 |
Cow position: | chrX:31081942-31082586 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 25 |
Conread position: | 25-594 |
Cow position: | chrX:17667921-17667325 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 8 |
Conread position: | 25-771 |
Cow position: | chrX:23019298-23020061 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 28 |
Conread position: | 35-772 |
Cow position: | chrX:6282761-6282026 (view UCSC Genome Browser custom track) |
Alignm length: | 761 |
Alignm identity: | 566 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 13 |
Conread position: | 36-555 |
Cow position: | chrX:44387106-44387635 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 57 |
Conread position: | 44-406 |
Cow position: | chrX:24112827-24112463 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 257 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 78, 16 |
Conread position: | 48-769 |
Cow position: | chrX:13053027-13053737 (view UCSC Genome Browser custom track) |
Alignm length: | 738 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 44 |
Conread position: | 49-777 |
Cow position: | chrX:13417417-13416696 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 11 |
Conread position: | 53-773 |
Cow position: | chrX:27960557-27961291 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 41 |
Conread position: | 89-312 |
Cow position: | chrX:28603412-28603190 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 16 |
Conread position: | 98-772 |
Cow position: | chrX:26767142-26766479 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 7 |
Conread position: | 99-332 |
Cow position: | chrX:22488238-22488473 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 26 |
Conread position: | 99-586 |
Cow position: | chrX:20697038-20696554 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 17 |
Conread position: | 99-701 |
Cow position: | chrX:21222985-21223588 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-759 |
Cow position: | chrX:15127185-15126516 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chrX:16699357-16700036 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chrX:21829581-21830262 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chrX:23041066-23040389 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chrX:26528033-26528709 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 100-762 |
Cow position: | chrX:20797036-20797690 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 18 |
Conread position: | 100-773 |
Cow position: | chrX:2482580-2481896 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 23 |
Conread position: | 101-227 |
Cow position: | chrX:26627974-26627843 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 103-773 |
Cow position: | chrX:23277079-23277760 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 35 |
Conread position: | 105-380 |
Cow position: | chrX:30056707-30056993 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 105-773 |
Cow position: | chrX:320529-321199 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 67 |
Conread position: | 105-773 |
Cow position: | chrX:970829-971509 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 428 |
Conread position: | 105-773 |
Cow position: | chrX:21058855-21059515 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 48 |
Conread position: | 106-773 |
Cow position: | chrX:29853504-29852831 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 110-772 |
Cow position: | chrX:29285504-29286162 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 198 |
Conread position: | 117-776 |
Cow position: | chrX:22619241-22618562 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 503 |
Conread position: | 119-632 |
Cow position: | chrX:26427571-26427056 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 236 |
Conread position: | 121-671 |
Cow position: | chrX:29794040-29793491 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 9 |
Conread position: | 121-671 |
Cow position: | chrX:30173601-30173040 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 495 |
Conread position: | 121-771 |
Cow position: | chrX:5863468-5864126 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 218 |
Conread position: | 121-773 |
Cow position: | chrX:13413061-13412398 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 25 |
Conread position: | 127-696 |
Cow position: | chrX:20359974-20359394 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 485 |
Conread position: | 127-756 |
Cow position: | chrX:7751977-7752623 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 127 |
Conread position: | 127-768 |
Cow position: | chrX:13076620-13075969 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 429 |
Conread position: | 127-771 |
Cow position: | chrX:12353317-12353973 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 485 |
Conread position: | 127-771 |
Cow position: | chrX:13097194-13096540 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 429 |
Conread position: | 127-771 |
Cow position: | chrX:27426243-27425594 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 485 |
Conread position: | 127-771 |
Cow position: | chrX:28585057-28585711 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 172 |
Conread position: | 127-771 |
Cow position: | chrX:31493497-31494150 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 324 |
Conread position: | 132-771 |
Cow position: | chrX:31198529-31199183 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 479 |
Conread position: | 133-771 |
Cow position: | chrX:7481715-7482364 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 479 |
Conread position: | 135-771 |
Cow position: | chrX:5394916-5394278 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 234 |
Conread position: | 142-771 |
Cow position: | chrX:15980858-15980227 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 279 |
Conread position: | 142-773 |
Cow position: | chrX:29950492-29949873 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 336 |
Conread position: | 163-773 |
Cow position: | chrX:1547096-1547707 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 248 |
Conread position: | 164-773 |
Cow position: | chrX:20720106-20720729 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 443 |
Conread position: | 165-773 |
Cow position: | chrX:21589091-21589701 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 343 |
Conread position: | 167-773 |
Cow position: | chrX:21579595-21580199 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 114 |
Conread position: | 168-771 |
Cow position: | chrX:12288274-12287672 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 200 |
Conread position: | 174-668 |
Cow position: | chrX:27495055-27495546 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 13 |
Conread position: | 185-773 |
Cow position: | chrX:30711727-30712321 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 272 |
Conread position: | 192-773 |
Cow position: | chrX:41851049-41850465 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 134 |
Conread position: | 196-774 |
Cow position: | chrX:4796458-4797059 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 59 |
Conread position: | 238-773 |
Cow position: | chrX:28651352-28650820 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 147 |
Conread position: | 243-773 |
Cow position: | chrX:15599167-15599699 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 31 |
Conread position: | 247-771 |
Cow position: | chrX:17478224-17477693 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 65 |
Conread position: | 260-773 |
Cow position: | chrX:16016210-16015704 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 166 |
Conread position: | 275-743 |
Cow position: | chrX:6884833-6884366 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 53 |
Conread position: | 276-773 |
Cow position: | chrX:28627408-28626901 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 20 |
Conread position: | 308-773 |
Cow position: | chrX:24134994-24134518 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 17 |
Conread position: | 313-771 |
Cow position: | chrX:29173495-29173031 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 294 |
Conread position: | 345-673 |
Cow position: | chrX:38038555-38038878 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 233 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 41, 63 |
Conread position: | 376-773 |
Cow position: | chrX:18953346-18952947 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 5 |
Conread position: | 380-771 |
Cow position: | chrX:28758157-28757763 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 224 |
Conread position: | 380-773 |
Cow position: | chrX:22488489-22488879 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 29 |
Conread position: | 395-773 |
Cow position: | chrX:22816204-22816583 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 8 |
Conread position: | 400-773 |
Cow position: | chrX:30366409-30366048 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 49 |
Conread position: | 439-771 |
Cow position: | chrX:30171436-30171101 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 45 |
Conread position: | 439-773 |
Cow position: | chrX:16041791-16041471 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 66 |
Conread position: | 451-773 |
Cow position: | chrX:30183509-30183186 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 149 |
Conread position: | 459-734 |
Cow position: | chrX:22129355-22129080 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 188 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 61, 139 |
Conread position: | 464-773 |
Cow position: | chrX:5297122-5296815 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 480-769 |
Cow position: | chrX:14595294-14595575 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 206 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 40, 113 |
Conread position: | 485-762 |
Cow position: | chrX:12315308-12315033 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 26, 14 |
Conread position: | 488-771 |
Cow position: | chrX:16811994-16811711 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 198 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 31, 113 |
Conread position: | 488-773 |
Cow position: | chrX:23390068-23389783 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 109 |
Conread position: | 496-773 |
Cow position: | chrX:38148051-38148324 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 203 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 25, 57 |
Conread position: | 501-734 |
Cow position: | chrX:31372279-31372508 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 18, 98 |
Conread position: | 502-773 |
Cow position: | chrX:18610932-18610666 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 511-710 |
Cow position: | chrX:18534979-18535173 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 93 |
Conread position: | 528-773 |
Cow position: | chrX:19874882-19875124 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 60, 70 |
Conread position: | 530-773 |
Cow position: | chrX:27315767-27316008 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 181 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 11, 58 |
Conread position: | 549-773 |
Cow position: | chrX:9093063-9093292 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 163 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 21, 43 |
Conread position: | 576-770 |
Cow position: | chrX:12183455-12183648 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 136 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 96, 15 |
Conread position: | 611-763 |
Cow position: | chrX:13082437-13082284 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 617-771 |
Cow position: | chrX:979172-979327 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.