Cow genome map
| Conread name: | LyN1-MLN01B080092 |
| Conread position: | 450-694 |
| Cow position: | chr1:72037111-72036871 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 450-716 |
| Cow position: | chr1:9260675-9260938 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 215, 83 |
| Conread position: | 450-719 |
| Cow position: | chr1:86704322-86704585 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 214, 83 |
| Conread position: | 454-716 |
| Cow position: | chr1:20831032-20831287 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 210, 81 |
| Conread position: | 454-716 |
| Cow position: | chr1:56725334-56725594 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 455-721 |
| Cow position: | chr1:73763418-73763158 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 457-718 |
| Cow position: | chr1:23970779-23970522 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 458-694 |
| Cow position: | chr1:56165708-56165942 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 210, 69 |
| Conread position: | 460-720 |
| Cow position: | chr1:57948243-57948498 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 461-712 |
| Cow position: | chr1:41780926-41780682 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 188, 66 |
| Conread position: | 462-721 |
| Cow position: | chr1:81869547-81869285 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 88 |
| Conread position: | 469-719 |
| Cow position: | chr1:27543328-27543577 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 471-719 |
| Cow position: | chr1:88675674-88675916 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 472-669 |
| Cow position: | chr1:89483332-89483521 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 472-686 |
| Cow position: | chr1:17189447-17189235 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-708 |
| Cow position: | chr1:82526572-82526801 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 472-710 |
| Cow position: | chr1:69768771-69769006 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:4210308-4210552 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:10724813-10725057 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:15437727-15437482 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:28713232-28713476 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:39545970-39546214 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:55274844-55274603 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:56620428-56620672 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:59206880-59206636 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 192, 55 |
| Conread position: | 472-719 |
| Cow position: | chr1:65570909-65570665 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-719 |
| Cow position: | chr1:67000723-67000479 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:82910630-82910388 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:90973143-90973386 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr1:100508940-100509188 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 170, 61 |
| Conread position: | 478-708 |
| Cow position: | chr1:53395710-53395938 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 478-719 |
| Cow position: | chr1:11856075-11855844 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 186, 49 |
| Conread position: | 478-719 |
| Cow position: | chr1:100605278-100605040 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 479-719 |
| Cow position: | chr1:76094662-76094424 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 480-721 |
| Cow position: | chr1:30439045-30439283 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 484-719 |
| Cow position: | chr1:55329191-55328963 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 484-719 |
| Cow position: | chr1:82367952-82368181 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 492-677 |
| Cow position: | chr1:21221882-21221703 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 492-719 |
| Cow position: | chr1:79254277-79254505 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 528-717 |
| Cow position: | chr1:99108996-99108804 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 528-719 |
| Cow position: | chr1:92281357-92281172 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 528-721 |
| Cow position: | chr1:51966518-51966714 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 531-719 |
| Cow position: | chr1:77164731-77164912 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 534-721 |
| Cow position: | chr1:99017811-99017624 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 16 |
Show alignments to all cow chromosomes.