Cow genome map
| Conread name: | LyN1-MLN01B080092 |
| Conread position: | 434-719 |
| Cow position: | chr3:6323686-6323968 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 231, 99 |
| Conread position: | 445-719 |
| Cow position: | chr3:63240182-63239915 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 151, 43 |
| Conread position: | 450-716 |
| Cow position: | chr3:19882539-19882783 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 244, 83 |
| Conread position: | 450-719 |
| Cow position: | chr3:20380679-20380413 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 214, 83 |
| Conread position: | 450-719 |
| Cow position: | chr3:48524793-48525057 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 212, 77 |
| Conread position: | 451-719 |
| Cow position: | chr3:1031020-1031282 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 451-719 |
| Cow position: | chr3:41208550-41208285 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 213, 82 |
| Conread position: | 452-655 |
| Cow position: | chr3:67770470-67770668 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 453-708 |
| Cow position: | chr3:59331490-59331735 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 215, 35 |
| Conread position: | 456-719 |
| Cow position: | chr3:56337901-56337641 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 456-719 |
| Cow position: | chr3:72670500-72670243 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 457-719 |
| Cow position: | chr3:15053651-15053402 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 98, 69 |
| Conread position: | 459-718 |
| Cow position: | chr3:79600126-79599881 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 459-719 |
| Cow position: | chr3:2870850-2871107 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 206, 74 |
| Conread position: | 459-719 |
| Cow position: | chr3:3982689-3982946 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 469-719 |
| Cow position: | chr3:63278548-63278307 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 470-719 |
| Cow position: | chr3:83766317-83766563 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 195, 63 |
| Conread position: | 472-678 |
| Cow position: | chr3:77425771-77425984 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 188 |
| Conread position: | 472-714 |
| Cow position: | chr3:77580694-77580924 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-716 |
| Cow position: | chr3:70719584-70719825 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:4288151-4288395 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:7156644-7156400 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:13035756-13036000 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-719 |
| Cow position: | chr3:18113620-18113376 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:19799086-19798842 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:27920516-27920760 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:28670156-28670399 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:29329216-29328972 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:30990178-30989934 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:34505279-34505036 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 190, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:37010112-37009868 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 472-719 |
| Cow position: | chr3:38495844-38496083 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 472-719 |
| Cow position: | chr3:46859218-46858974 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-719 |
| Cow position: | chr3:49003237-49003481 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:68697901-68697657 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chr3:68890502-68890261 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 189, 61 |
| Conread position: | 472-721 |
| Cow position: | chr3:40338073-40337827 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 473-719 |
| Cow position: | chr3:70889356-70889591 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 195, 46 |
| Conread position: | 478-719 |
| Cow position: | chr3:15657465-15657229 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 186, 55 |
| Conread position: | 480-717 |
| Cow position: | chr3:18760319-18760095 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 484-678 |
| Cow position: | chr3:1886343-1886156 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 520-694 |
| Cow position: | chr3:13467130-13466961 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 528-718 |
| Cow position: | chr3:52662520-52662712 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 539-717 |
| Cow position: | chr3:40102668-40102494 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 131, 0 |
Show alignments to all cow chromosomes.