Cow genome map
| Conread name: | LyN1-MLN01B080092 |
| Conread position: | 443-663 |
| Cow position: | chr5:306445-306232 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-719 |
| Cow position: | chr5:55993486-55993223 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 454-719 |
| Cow position: | chr5:26077245-26076984 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 211, 79 |
| Conread position: | 455-719 |
| Cow position: | chr5:41955409-41955151 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 456-719 |
| Cow position: | chr5:73457124-73457387 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 459-713 |
| Cow position: | chr5:39393125-39392881 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 72 |
| Conread position: | 459-719 |
| Cow position: | chr5:4352598-4352843 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 459-719 |
| Cow position: | chr5:50605376-50605120 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 469-679 |
| Cow position: | chr5:57364593-57364386 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 195, 55 |
| Conread position: | 469-710 |
| Cow position: | chr5:27172666-27172897 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 470-713 |
| Cow position: | chr5:4964398-4964161 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 198, 63 |
| Conread position: | 470-719 |
| Cow position: | chr5:64780034-64779788 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 194, 63 |
| Conread position: | 472-716 |
| Cow position: | chr5:18120501-18120260 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-716 |
| Cow position: | chr5:40130618-40130377 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-717 |
| Cow position: | chr5:28024685-28024916 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 472-719 |
| Cow position: | chr5:5925989-5925745 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 472-719 |
| Cow position: | chr5:9056635-9056879 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr5:13407571-13407815 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr5:30567247-30567492 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-719 |
| Cow position: | chr5:50391132-50390888 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chr5:58197998-58198239 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 477-719 |
| Cow position: | chr5:12730733-12730494 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 187, 56 |
| Conread position: | 477-719 |
| Cow position: | chr5:48533920-48534159 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 163, 42 |
| Conread position: | 478-696 |
| Cow position: | chr5:62375909-62376121 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 478-718 |
| Cow position: | chr5:43989046-43989294 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 484-719 |
| Cow position: | chr5:23847132-23846901 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 484-719 |
| Cow position: | chr5:41979493-41979715 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 488-712 |
| Cow position: | chr5:46627269-46627054 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 488-719 |
| Cow position: | chr5:14544310-14544085 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 206, 45 |
| Conread position: | 488-719 |
| Cow position: | chr5:31121212-31120986 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 146, 47 |
| Conread position: | 493-719 |
| Cow position: | chr5:7756275-7756504 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 57 |
Show alignments to all cow chromosomes.