Cow genome map
| Conread name: | LyN1-MLN01B080092 |
| Conread position: | 442-719 |
| Cow position: | chrX:20799220-20799494 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 84 |
| Conread position: | 443-719 |
| Cow position: | chrX:16036511-16036241 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 224, 45 |
| Conread position: | 446-719 |
| Cow position: | chrX:11458879-11458608 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 218, 73 |
| Conread position: | 450-702 |
| Cow position: | chrX:24323624-24323374 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 215, 77 |
| Conread position: | 450-710 |
| Cow position: | chrX:16361177-16360920 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 450-716 |
| Cow position: | chrX:31727412-31727665 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 244, 77 |
| Conread position: | 450-719 |
| Cow position: | chrX:12652562-12652299 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 215, 77 |
| Conread position: | 450-719 |
| Cow position: | chrX:21792560-21792817 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 450-719 |
| Cow position: | chrX:23021243-23021509 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 214, 83 |
| Conread position: | 450-719 |
| Cow position: | chrX:24446282-24446016 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 215, 83 |
| Conread position: | 450-719 |
| Cow position: | chrX:27984659-27984398 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 218, 83 |
| Conread position: | 451-719 |
| Cow position: | chrX:14596786-14597048 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 213, 82 |
| Conread position: | 451-719 |
| Cow position: | chrX:22565758-22565493 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 123, 82 |
| Conread position: | 451-719 |
| Cow position: | chrX:27424356-27424091 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 213, 82 |
| Conread position: | 452-714 |
| Cow position: | chrX:7032395-7032655 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 452-716 |
| Cow position: | chrX:6871152-6870891 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 210, 81 |
| Conread position: | 452-719 |
| Cow position: | chrX:12358818-12359082 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 213, 81 |
| Conread position: | 452-719 |
| Cow position: | chrX:17476478-17476214 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 212, 81 |
| Conread position: | 453-719 |
| Cow position: | chrX:10529850-10529595 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 212, 80 |
| Conread position: | 454-719 |
| Cow position: | chrX:1941419-1941166 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 454-721 |
| Cow position: | chrX:43791223-43790959 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 455-710 |
| Cow position: | chrX:31979915-31979663 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 209, 78 |
| Conread position: | 455-719 |
| Cow position: | chrX:7095433-7095691 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 210, 78 |
| Conread position: | 456-719 |
| Cow position: | chrX:28608156-28607900 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 207, 79 |
| Conread position: | 457-719 |
| Cow position: | chrX:5678388-5678131 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 457-719 |
| Cow position: | chrX:28505327-28505068 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 117, 76 |
| Conread position: | 457-719 |
| Cow position: | chrX:35283229-35283499 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 209, 80 |
| Conread position: | 458-719 |
| Cow position: | chrX:2010681-2010426 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 209, 77 |
| Conread position: | 469-719 |
| Cow position: | chrX:20358055-20357808 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 470-678 |
| Cow position: | chrX:9066633-9066834 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 470-686 |
| Cow position: | chrX:21581438-21581651 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 198, 63 |
| Conread position: | 470-707 |
| Cow position: | chrX:8513242-8513471 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 470-710 |
| Cow position: | chrX:16781235-16781476 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 198, 63 |
| Conread position: | 470-719 |
| Cow position: | chrX:14783528-14783285 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 198, 63 |
| Conread position: | 471-714 |
| Cow position: | chrX:24110621-24110382 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 472-644 |
| Cow position: | chrX:28550470-28550636 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 472-651 |
| Cow position: | chrX:16683881-16683708 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 472-694 |
| Cow position: | chrX:2578374-2578593 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 472-713 |
| Cow position: | chrX:28520648-28520410 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:2814529-2814285 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:3359779-3360022 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:3373970-3373726 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:3419270-3419026 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 89, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:11147379-11147147 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:15261661-15261425 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 472-719 |
| Cow position: | chrX:15622542-15622298 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 472-719 |
| Cow position: | chrX:18657853-18657609 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:19397725-19397968 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:24411981-24412220 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:24730598-24730842 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 196, 55 |
| Conread position: | 472-719 |
| Cow position: | chrX:29095367-29095123 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:32065214-32064970 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 472-719 |
| Cow position: | chrX:34093879-34093635 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 472-719 |
| Cow position: | chrX:39561983-39561739 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 475-719 |
| Cow position: | chrX:31511559-31511805 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 477-716 |
| Cow position: | chrX:28556346-28556580 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 478-714 |
| Cow position: | chrX:13180596-13180372 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 478-716 |
| Cow position: | chrX:6248217-6247989 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 215, 51 |
| Conread position: | 478-718 |
| Cow position: | chrX:28867286-28867051 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 478-718 |
| Cow position: | chrX:41887040-41886809 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 478-719 |
| Cow position: | chrX:32328169-32328402 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 483-718 |
| Cow position: | chrX:47395044-47394811 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 163, 50 |
| Conread position: | 484-719 |
| Cow position: | chrX:2381473-2381694 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 484-719 |
| Cow position: | chrX:36838679-36838914 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 488-710 |
| Cow position: | chrX:23133575-23133788 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 515-719 |
| Cow position: | chrX:30071878-30072085 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 152, 16 |
Show alignments to all cow chromosomes.