Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-374 |
| Cow position: | chr12:1869592-1869969 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 1-377 |
| Cow position: | chr12:11098543-11098911 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 1-377 |
| Cow position: | chr12:27855659-27855289 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 1-381 |
| Cow position: | chr12:1402791-1403172 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 1-381 |
| Cow position: | chr12:3631567-3631185 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 181 |
| Conread position: | 1-381 |
| Cow position: | chr12:6406350-6405966 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr12:21198261-21198640 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 52 |
| Conread position: | 1-381 |
| Cow position: | chr12:22205447-22205063 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr12:27932644-27932249 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 148 |
| Conread position: | 1-386 |
| Cow position: | chr12:28765722-28765335 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-396 |
| Cow position: | chr12:42859528-42859128 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 228 |
| Conread position: | 2-386 |
| Cow position: | chr12:14662331-14661947 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 241 |
| Conread position: | 5-381 |
| Cow position: | chr12:25100757-25100378 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 6-249 |
| Cow position: | chr12:33986461-33986705 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 231 |
| Conread position: | 6-259 |
| Cow position: | chr12:21254358-21254111 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 6-263 |
| Cow position: | chr12:16821774-16822032 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-268 |
| Cow position: | chr12:21426993-21427254 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 27 |
| Conread position: | 6-371 |
| Cow position: | chr12:37558855-37559217 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 33 |
| Conread position: | 6-386 |
| Cow position: | chr12:3361203-3361609 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 260 |
| Conread position: | 6-386 |
| Cow position: | chr12:4157676-4158060 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr12:8197515-8197899 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 231 |
| Conread position: | 6-386 |
| Cow position: | chr12:32653843-32654226 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 229 |
| Conread position: | 7-357 |
| Cow position: | chr12:2282863-2283217 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 233 |
| Conread position: | 7-381 |
| Cow position: | chr12:10485359-10485733 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 7-386 |
| Cow position: | chr12:43031085-43030704 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 16-381 |
| Cow position: | chr12:21226654-21226290 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 22-381 |
| Cow position: | chr12:8677767-8677422 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 124 |
| Conread position: | 23-381 |
| Cow position: | chr12:601041-600678 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 223 |
| Conread position: | 58-331 |
| Cow position: | chr12:12292266-12292542 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 68-177 |
| Cow position: | chr12:36482802-36482912 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 68-381 |
| Cow position: | chr12:36367197-36367514 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 68-381 |
| Cow position: | chr12:36427600-36427911 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 68-381 |
| Cow position: | chr12:36448942-36449256 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 229 |
| Conread position: | 68-384 |
| Cow position: | chr12:36479538-36479857 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 74-386 |
| Cow position: | chr12:20997721-20997413 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 140, 10 |
| Conread position: | 102-344 |
| Cow position: | chr12:21942133-21942377 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 128-386 |
| Cow position: | chr12:21209090-21209336 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 137-386 |
| Cow position: | chr12:35314220-35313973 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 146-387 |
| Cow position: | chr12:25263027-25262783 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 148-386 |
| Cow position: | chr12:1889069-1888831 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 68, 90 |
| Conread position: | 238-386 |
| Cow position: | chr12:21428391-21428542 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 650-847 |
| Cow position: | chr12:28765336-28765140 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 651-831 |
| Cow position: | chr12:27932222-27932044 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 660-845 |
| Cow position: | chr12:27855273-27855089 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.