Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-108 |
| Cow position: | chr13:34766793-34766685 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-212 |
| Cow position: | chr13:22766104-22766316 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 98, 171 |
| Conread position: | 1-247 |
| Cow position: | chr13:11064088-11063851 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 1-249 |
| Cow position: | chr13:60700767-60700532 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 210, 106 |
| Conread position: | 1-342 |
| Cow position: | chr13:30238325-30238668 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 156 |
| Conread position: | 1-349 |
| Cow position: | chr13:4941168-4941512 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 1-356 |
| Cow position: | chr13:33336339-33335993 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 34 |
| Conread position: | 1-377 |
| Cow position: | chr13:1593077-1592697 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 241 |
| Conread position: | 1-377 |
| Cow position: | chr13:34042289-34041914 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-381 |
| Cow position: | chr13:15924304-15923920 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr13:27922150-27921776 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 152 |
| Conread position: | 1-381 |
| Cow position: | chr13:35757322-35757705 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 1-386 |
| Cow position: | chr13:23003229-23002841 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-386 |
| Cow position: | chr13:34937570-34937945 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 1-398 |
| Cow position: | chr13:9044580-9044981 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 2-125 |
| Cow position: | chr13:48357645-48357767 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 2-235 |
| Cow position: | chr13:29202279-29202042 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 2-258 |
| Cow position: | chr13:26844174-26844424 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 24 |
| Conread position: | 2-344 |
| Cow position: | chr13:19413305-19413628 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 2-354 |
| Cow position: | chr13:2582580-2582233 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 2-381 |
| Cow position: | chr13:30303357-30303742 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 238 |
| Conread position: | 2-381 |
| Cow position: | chr13:30656899-30656524 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 71 |
| Conread position: | 4-381 |
| Cow position: | chr13:31556633-31556268 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 220, 90 |
| Conread position: | 4-381 |
| Cow position: | chr13:43982999-43982625 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 163 |
| Conread position: | 4-386 |
| Cow position: | chr13:34048707-34049090 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 5-381 |
| Cow position: | chr13:3654241-3653861 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 242 |
| Conread position: | 5-381 |
| Cow position: | chr13:4483877-4484258 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 234 |
| Conread position: | 5-381 |
| Cow position: | chr13:6668036-6667659 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 5-381 |
| Cow position: | chr13:32737741-32737365 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 6-202 |
| Cow position: | chr13:2296735-2296542 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 6-323 |
| Cow position: | chr13:3058032-3057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 142 |
| Conread position: | 6-381 |
| Cow position: | chr13:49973763-49974141 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 6-384 |
| Cow position: | chr13:50109539-50109913 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 231 |
| Conread position: | 6-386 |
| Cow position: | chr13:2388740-2388351 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 244 |
| Conread position: | 6-386 |
| Cow position: | chr13:13324827-13325202 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr13:17308553-17308936 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 74 |
| Conread position: | 6-386 |
| Cow position: | chr13:21840119-21839736 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 6-386 |
| Cow position: | chr13:30244600-30244217 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr13:31734007-31733623 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr13:32985268-32984887 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr13:34868827-34869209 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 166 |
| Conread position: | 6-386 |
| Cow position: | chr13:35030626-35031002 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 6-386 |
| Cow position: | chr13:47229923-47229539 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr13:60466415-60466792 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 7-210 |
| Cow position: | chr13:34029167-34029369 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 83 |
| Conread position: | 7-381 |
| Cow position: | chr13:34325478-34325100 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 238 |
| Conread position: | 7-386 |
| Cow position: | chr13:20541953-20541574 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 239 |
| Conread position: | 12-381 |
| Cow position: | chr13:15520407-15520048 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 14 |
| Conread position: | 21-376 |
| Cow position: | chr13:57023802-57024157 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 21-386 |
| Cow position: | chr13:41315952-41316321 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 216 |
| Conread position: | 22-265 |
| Cow position: | chr13:34911063-34910821 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 27-386 |
| Cow position: | chr13:58118808-58118446 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 29-338 |
| Cow position: | chr13:36959443-36959139 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 29-381 |
| Cow position: | chr13:31612201-31611843 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 215 |
| Conread position: | 29-381 |
| Cow position: | chr13:32545484-32545840 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 209 |
| Conread position: | 35-387 |
| Cow position: | chr13:676970-677338 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 215 |
| Conread position: | 44-375 |
| Cow position: | chr13:15450990-15450660 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 55-381 |
| Cow position: | chr13:13899999-13900328 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 181 |
| Conread position: | 66-265 |
| Cow position: | chr13:11799579-11799381 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 99-323 |
| Cow position: | chr13:5625901-5625681 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 114-376 |
| Cow position: | chr13:34766651-34766405 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 120-336 |
| Cow position: | chr13:18331607-18331825 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 83, 116 |
| Conread position: | 149-386 |
| Cow position: | chr13:12063727-12063487 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 166-381 |
| Cow position: | chr13:11063775-11063572 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 200, 42 |
| Conread position: | 208-386 |
| Cow position: | chr13:16255093-16254916 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 644-790 |
| Cow position: | chr13:35757703-35757848 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr13:3653863-3653661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr13:15520050-15519848 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr13:30303740-30303942 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr13:31611845-31611648 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 645-847 |
| Cow position: | chr13:1592694-1592496 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 659-840 |
| Cow position: | chr13:41696336-41696515 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.