Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-102
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-187
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 104, 167

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 104, 19

Conread position: 1-229
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 29

Conread position: 1-235
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 171

Conread position: 1-236
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 197

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 56

Conread position: 1-343
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 1-352
Cow position:
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 1-357
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 26

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 131

Conread position: 1-361
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 94

Conread position: 1-379
Cow position:
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 57

Conread position: 1-380
Cow position:
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 237

Conread position: 1-380
Cow position:
Alignm length: 384
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 92

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 167

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 190

Conread position: 1-381
Cow position:
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 1-381
Cow position:
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 244

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 238

Conread position: 1-383
Cow position:
Alignm length: 393
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 344

Conread position: 1-385
Cow position:
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 20

Conread position: 1-386
Cow position:
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 1-390
Cow position:
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 15

Conread position: 2-158
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 0

Conread position: 2-354
Cow position:
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 212, 58

Conread position: 2-357
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 219

Conread position: 2-365
Cow position:
Alignm length: 384
Alignm identity: 256
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 47

Conread position: 2-381
Cow position:
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position:
Alignm length: 392
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-386
Cow position:
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-387
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 235

Conread position: 2-387
Cow position:
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 2-391
Cow position:
Alignm length: 420
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 42

Conread position: 4-357
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 207, 25

Conread position: 4-376
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 93

Conread position: 5-226
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 5-226
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 26

Conread position: 5-377
Cow position:
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 135

Conread position: 5-380
Cow position:
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 5-381
Cow position:
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 238

Conread position: 6-246
Cow position:
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-259
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 158

Conread position: 6-342
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 202, 33

Conread position: 6-358
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-376
Cow position:
Alignm length: 378
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 6-381
Cow position:
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-384
Cow position:
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 176

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 119

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position:
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 143

Conread position: 6-387
Cow position:
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 245

Conread position: 7-381
Cow position:
Alignm length: 381
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 8-384
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 65

Conread position: 12-386
Cow position:
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 76

Conread position: 13-333
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 21

Conread position: 13-386
Cow position:
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 229

Conread position: 14-386
Cow position:
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 65

Conread position: 16-365
Cow position:
Alignm length: 352
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 17-228
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 21-386
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 217

Conread position: 22-361
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 81, 22

Conread position: 22-381
Cow position:
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 80

Conread position: 22-386
Cow position:
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 51

Conread position: 23-358
Cow position:
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 143

Conread position: 25-332
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 184, 88

Conread position: 26-386
Cow position:
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 156

Conread position: 44-357
Cow position:
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 39

Conread position: 80-381
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 158

Conread position: 93-377
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 142

Conread position: 95-381
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 78

Conread position: 104-365
Cow position:
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 59

Conread position: 137-381
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 100

Conread position: 138-381
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 99

Conread position: 149-386
Cow position:
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 93

Conread position: 149-386
Cow position:
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 150-386
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 151-350
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 75

Conread position: 163-357
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 64

Conread position: 165-381
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 77

Conread position: 183-386
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 55

Conread position: 190-381
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 52

Conread position: 198-386
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 44

Conread position: 200-381
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 41

Conread position: 209-386
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 32

Conread position: 231-381
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 10

Conread position: 237-386
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 101

Conread position: 243-386
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 75, 96

Conread position: 634-847
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 82

Conread position: 639-847
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 75

Conread position: 640-809
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 30

Conread position: 644-841
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 644-846
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 645-846
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 650-841
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 65

Conread position: 650-847
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.