Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-127
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 31

Conread position: 1-169
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 84

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 56

Conread position: 1-235
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 124

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-259
Cow position:
Alignm length: 260
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 199

Conread position: 1-341
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 1-349
Cow position:
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 171

Conread position: 1-350
Cow position:
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-360
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 43

Conread position: 1-361
Cow position:
Alignm length: 363
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 59

Conread position: 1-365
Cow position:
Alignm length: 372
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 1-377
Cow position:
Alignm length: 383
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-377
Cow position:
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-378
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 177

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 236

Conread position: 1-381
Cow position:
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 172

Conread position: 1-381
Cow position:
Alignm length: 391
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 246

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 394
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 158

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 103

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 86

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 241

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 241

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 120

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 48

Conread position: 1-381
Cow position:
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 46

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 93

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position:
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-384
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 251

Conread position: 1-385
Cow position:
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 12

Conread position: 1-386
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-386
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 34

Conread position: 2-246
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 147

Conread position: 2-349
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 185

Conread position: 2-356
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-376
Cow position:
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-378
Cow position:
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 2-381
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 10

Conread position: 2-381
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 92

Conread position: 2-381
Cow position:
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 2-386
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 178

Conread position: 2-386
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 55

Conread position: 3-263
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 101, 24

Conread position: 5-235
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 106, 82

Conread position: 5-257
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 30

Conread position: 5-303
Cow position:
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 239

Conread position: 5-338
Cow position:
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 42

Conread position: 5-338
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 39

Conread position: 5-380
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 94

Conread position: 5-381
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 16

Conread position: 5-381
Cow position:
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 5-381
Cow position:
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 7

Conread position: 5-381
Cow position:
Alignm length: 383
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 6-196
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 6-212
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 16

Conread position: 6-217
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-222
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 6-247
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 111

Conread position: 6-310
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 171

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 103, 234

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 184

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 136

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 391
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 71

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 6-386
Cow position:
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 110

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 139

Conread position: 6-387
Cow position:
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 7-386
Cow position:
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 7-386
Cow position:
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 230

Conread position: 8-381
Cow position:
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 234

Conread position: 12-386
Cow position:
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 55

Conread position: 12-386
Cow position:
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 225

Conread position: 13-381
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 25

Conread position: 15-358
Cow position:
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 225

Conread position: 20-323
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 185, 170

Conread position: 22-381
Cow position:
Alignm length: 367
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 56

Conread position: 23-381
Cow position:
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 215

Conread position: 23-381
Cow position:
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 27-383
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 43

Conread position: 27-386
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 152

Conread position: 28-258
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 24

Conread position: 30-381
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 35-269
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 70

Conread position: 41-386
Cow position:
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 200

Conread position: 45-318
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 124

Conread position: 48-195
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 31

Conread position: 54-381
Cow position:
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 75

Conread position: 65-386
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 7

Conread position: 66-386
Cow position:
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 74-386
Cow position:
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 169

Conread position: 80-344
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 102

Conread position: 80-374
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 118, 73

Conread position: 81-381
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 161

Conread position: 82-386
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 122

Conread position: 88-381
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 43

Conread position: 88-381
Cow position:
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 97-265
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 140

Conread position: 101-365
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 51

Conread position: 120-380
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 8

Conread position: 126-354
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 111

Conread position: 128-380
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 42

Conread position: 131-384
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 106

Conread position: 148-386
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 95

Conread position: 176-386
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 66

Conread position: 178-346
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 64

Conread position: 223-386
Cow position:
Alignm length: 168
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 115

Conread position: 224-386
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 20

Conread position: 224-386
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 17

Conread position: 240-381
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 99

Conread position: 258-386
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 78

Conread position: 640-847
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 640-847
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 640-847
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 53

Conread position: 644-830
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 71

Conread position: 644-847
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 18

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 645-847
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 650-758
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 653-846
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 660-847
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.