Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-335 |
| Cow position: | chr18:37505458-37505791 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 1-370 |
| Cow position: | chr18:27837921-27837552 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-381 |
| Cow position: | chr18:14130786-14131166 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr18:14416371-14416758 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 240 |
| Conread position: | 1-381 |
| Cow position: | chr18:16176223-16175841 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 183 |
| Conread position: | 1-381 |
| Cow position: | chr18:23798042-23798421 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 32 |
| Conread position: | 1-381 |
| Cow position: | chr18:25363617-25363993 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 1-381 |
| Cow position: | chr18:27987459-27987845 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr18:28973507-28973111 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 255 |
| Conread position: | 1-381 |
| Cow position: | chr18:32652598-32652990 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 1-381 |
| Cow position: | chr18:36508728-36509112 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 237 |
| Conread position: | 1-381 |
| Cow position: | chr18:40478778-40479162 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr18:41840429-41840035 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 246 |
| Conread position: | 1-381 |
| Cow position: | chr18:51481230-51481613 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 1-381 |
| Cow position: | chr18:52651315-52651690 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 1-386 |
| Cow position: | chr18:33269221-33269603 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 1-386 |
| Cow position: | chr18:33336258-33336650 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 239 |
| Conread position: | 1-386 |
| Cow position: | chr18:33750411-33750791 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 1-386 |
| Cow position: | chr18:54023730-54023357 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 145 |
| Conread position: | 1-386 |
| Cow position: | chr18:54171142-54170753 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 160 |
| Conread position: | 2-264 |
| Cow position: | chr18:46868165-46867911 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 2-349 |
| Cow position: | chr18:8169098-8169448 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 236 |
| Conread position: | 2-376 |
| Cow position: | chr18:29765368-29765746 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 235 |
| Conread position: | 2-386 |
| Cow position: | chr18:16088542-16088925 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 236 |
| Conread position: | 6-258 |
| Cow position: | chr18:54003921-54004163 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 202, 83 |
| Conread position: | 6-375 |
| Cow position: | chr18:51276606-51276240 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 6-381 |
| Cow position: | chr18:19352776-19353144 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 6-386 |
| Cow position: | chr18:11274712-11274328 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr18:22602881-22603263 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 143 |
| Conread position: | 6-386 |
| Cow position: | chr18:33953181-33952802 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 111 |
| Conread position: | 6-386 |
| Cow position: | chr18:51342080-51342464 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 238 |
| Conread position: | 6-386 |
| Cow position: | chr18:51462685-51462305 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 6-386 |
| Cow position: | chr18:51660741-51661120 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 182 |
| Conread position: | 6-387 |
| Cow position: | chr18:55088530-55088141 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 241 |
| Conread position: | 8-356 |
| Cow position: | chr18:46691147-46690806 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 8-386 |
| Cow position: | chr18:24040336-24039947 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 242 |
| Conread position: | 9-386 |
| Cow position: | chr18:25351151-25351534 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 11-365 |
| Cow position: | chr18:54270913-54271261 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 147 |
| Conread position: | 23-381 |
| Cow position: | chr18:51238711-51239071 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 75, 130 |
| Conread position: | 27-379 |
| Cow position: | chr18:55991319-55990984 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 291, 17 |
| Conread position: | 41-356 |
| Cow position: | chr18:46669489-46669179 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 73-384 |
| Cow position: | chr18:16079138-16079447 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 80-333 |
| Cow position: | chr18:208148-207901 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 82-381 |
| Cow position: | chr18:36256748-36256456 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 91-356 |
| Cow position: | chr18:10036366-10036094 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 116-381 |
| Cow position: | chr18:51275529-51275263 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 127-381 |
| Cow position: | chr18:19406027-19405771 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 197-386 |
| Cow position: | chr18:29237536-29237714 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 210-381 |
| Cow position: | chr18:20262782-20262611 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 122, 32 |
| Conread position: | 631-847 |
| Cow position: | chr18:27837549-27837337 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 635-847 |
| Cow position: | chr18:16175853-16175643 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 644-840 |
| Cow position: | chr18:41840037-41839842 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 644-846 |
| Cow position: | chr18:40479160-40479361 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr18:14416756-14416958 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr18:28973113-28972911 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr18:37506732-37506934 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr18:52651688-52651885 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 650-847 |
| Cow position: | chr18:25351533-25351729 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.