Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-240 |
| Cow position: | chr19:352249-352012 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 126, 30 |
| Conread position: | 1-342 |
| Cow position: | chr19:136608-136277 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 1-351 |
| Cow position: | chr19:40852038-40851687 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 163 |
| Conread position: | 1-352 |
| Cow position: | chr19:3138336-3138689 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 218 |
| Conread position: | 1-381 |
| Cow position: | chr19:172611-172987 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 78 |
| Conread position: | 1-381 |
| Cow position: | chr19:204356-204737 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr19:439041-438658 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 241 |
| Conread position: | 1-381 |
| Cow position: | chr19:2273986-2273604 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 1-381 |
| Cow position: | chr19:5729229-5729613 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr19:7488712-7489092 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 66 |
| Conread position: | 1-381 |
| Cow position: | chr19:33873826-33874203 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 151 |
| Conread position: | 1-381 |
| Cow position: | chr19:33942010-33942382 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 1-381 |
| Cow position: | chr19:39185146-39184761 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 340 |
| Conread position: | 1-381 |
| Cow position: | chr19:39390908-39391288 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 162 |
| Conread position: | 1-382 |
| Cow position: | chr19:893208-892824 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 236 |
| Conread position: | 1-386 |
| Cow position: | chr19:162700-162324 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 79 |
| Conread position: | 2-215 |
| Cow position: | chr19:10514092-10513877 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 2-372 |
| Cow position: | chr19:39669108-39668744 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 2-381 |
| Cow position: | chr19:4386012-4386404 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 148 |
| Conread position: | 3-381 |
| Cow position: | chr19:341621-341996 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 4-348 |
| Cow position: | chr19:33444025-33443676 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 4-361 |
| Cow position: | chr19:32182678-32182327 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 92, 142 |
| Conread position: | 4-386 |
| Cow position: | chr19:35385345-35384966 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 5-381 |
| Cow position: | chr19:75848-75473 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 5-381 |
| Cow position: | chr19:28581257-28580881 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 233 |
| Conread position: | 5-381 |
| Cow position: | chr19:40887331-40886967 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 5-386 |
| Cow position: | chr19:27052111-27051722 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 6-179 |
| Cow position: | chr19:5208570-5208744 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 6-211 |
| Cow position: | chr19:38293-38499 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 199 |
| Conread position: | 6-354 |
| Cow position: | chr19:28593662-28594008 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 182 |
| Conread position: | 6-384 |
| Cow position: | chr19:52151432-52151053 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr19:772994-773377 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 169 |
| Conread position: | 6-386 |
| Cow position: | chr19:7342469-7342849 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 6-386 |
| Cow position: | chr19:32211675-32211293 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr19:43144114-43144492 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 67 |
| Conread position: | 7-361 |
| Cow position: | chr19:39095444-39095800 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 160 |
| Conread position: | 19-172 |
| Cow position: | chr19:43511-43663 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 20-347 |
| Cow position: | chr19:27037130-27036815 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 22-386 |
| Cow position: | chr19:20105125-20105492 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 221 |
| Conread position: | 23-384 |
| Cow position: | chr19:168185-167820 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 215 |
| Conread position: | 27-381 |
| Cow position: | chr19:674819-674467 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 40-376 |
| Cow position: | chr19:32203581-32203919 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 161 |
| Conread position: | 44-361 |
| Cow position: | chr19:5901058-5900738 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 223 |
| Conread position: | 86-374 |
| Cow position: | chr19:10956746-10956460 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 90-381 |
| Cow position: | chr19:12773602-12773895 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 109-305 |
| Cow position: | chr19:189924-190119 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 128 |
| Conread position: | 144-386 |
| Cow position: | chr19:28406166-28405921 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 145-307 |
| Cow position: | chr19:40817183-40817026 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 152-281 |
| Cow position: | chr19:50685239-50685366 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 166-367 |
| Cow position: | chr19:35377930-35378133 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 188-335 |
| Cow position: | chr19:377028-376878 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 192-377 |
| Cow position: | chr19:38793-38977 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 197-381 |
| Cow position: | chr19:53844166-53844366 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 234-386 |
| Cow position: | chr19:28567294-28567141 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 640-846 |
| Cow position: | chr19:28580887-28580682 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 644-784 |
| Cow position: | chr19:204735-204876 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 644-790 |
| Cow position: | chr19:39668716-39668576 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 644-821 |
| Cow position: | chr19:39002283-39002107 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr19:33942380-33942582 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 644-847 |
| Cow position: | chr19:39184763-39184561 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.