Cow genome map


           Conread name:
           LyN1-MLN01E060086
        

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 163
               

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 218
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 78
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 241
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 238
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 66
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 151
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 51
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 340
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 162
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 236
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 79
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 74
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 148
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               4-348
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               4-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               92, 142
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               114, 16
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 39
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 233
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               6-179
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 199
               

               Conread position:
               6-354
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 182
               

               Conread position:
               6-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 169
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 25
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 67
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               19-172
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               20-347
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               22-386
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 221
               

               Conread position:
               23-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 215
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               40-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 161
               

               Conread position:
               44-361
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 223
               

               Conread position:
               86-374
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               90-381
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               109-305
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 128
               

               Conread position:
               144-386
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               145-307
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               152-281
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               166-367
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               188-335
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               192-377
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               197-381
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               234-386
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               640-846
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               644-784
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               644-790
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               644-821
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.