Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-134
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-143
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-235
Cow position:
Alignm length: 237
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 242

Conread position: 1-263
Cow position:
Alignm length: 264
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 115

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1-343
Cow position:
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 1-345
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 43

Conread position: 1-346
Cow position:
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 70

Conread position: 1-352
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 26

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 78

Conread position: 1-365
Cow position:
Alignm length: 379
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 245

Conread position: 1-374
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 1-374
Cow position:
Alignm length: 380
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 238

Conread position: 1-376
Cow position:
Alignm length: 382
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-376
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 104, 121

Conread position: 1-377
Cow position:
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 219

Conread position: 1-377
Cow position:
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-377
Cow position:
Alignm length: 383
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-378
Cow position:
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 390
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 236

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 1-381
Cow position:
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 20

Conread position: 1-381
Cow position:
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 1-381
Cow position:
Alignm length: 385
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 1-384
Cow position:
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 229

Conread position: 1-384
Cow position:
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 146

Conread position: 1-386
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 30

Conread position: 1-386
Cow position:
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 135

Conread position: 1-386
Cow position:
Alignm length: 394
Alignm identity: 263
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 21, 91

Conread position: 1-386
Cow position:
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 50

Conread position: 1-386
Cow position:
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 2-113
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 2-343
Cow position:
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position:
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 50

Conread position: 2-386
Cow position:
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 3-388
Cow position:
Alignm length: 405
Alignm identity: 277
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 156

Conread position: 4-338
Cow position:
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 17

Conread position: 5-235
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 204, 93

Conread position: 5-357
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 160

Conread position: 5-365
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 38

Conread position: 5-366
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 110, 39

Conread position: 5-381
Cow position:
Alignm length: 383
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 5-381
Cow position:
Alignm length: 383
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 5-384
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 83

Conread position: 6-154
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 6-239
Cow position:
Alignm length: 234
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-251
Cow position:
Alignm length: 247
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 200, 109

Conread position: 6-264
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-305
Cow position:
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 154

Conread position: 6-310
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-333
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 35

Conread position: 6-335
Cow position:
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-355
Cow position:
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 6-364
Cow position:
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-381
Cow position:
Alignm length: 379
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 6-384
Cow position:
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-385
Cow position:
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 241

Conread position: 6-386
Cow position:
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 237

Conread position: 6-386
Cow position:
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-386
Cow position:
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 81

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 112

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 51

Conread position: 6-386
Cow position:
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-386
Cow position:
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position:
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 6-387
Cow position:
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 7-265
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 98, 233

Conread position: 7-386
Cow position:
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 8-381
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 22

Conread position: 12-250
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 13-386
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 230

Conread position: 16-388
Cow position:
Alignm length: 376
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 222

Conread position: 18-386
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 19-386
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 246

Conread position: 20-366
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 166

Conread position: 21-381
Cow position:
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 224

Conread position: 22-222
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 90

Conread position: 22-381
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 84, 127

Conread position: 22-386
Cow position:
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 51

Conread position: 23-381
Cow position:
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 195

Conread position: 26-412
Cow position:
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 212

Conread position: 27-381
Cow position:
Alignm length: 364
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 114

Conread position: 31-321
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 241, 16

Conread position: 31-348
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 48

Conread position: 31-359
Cow position:
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 130

Conread position: 35-201
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 39-381
Cow position:
Alignm length: 350
Alignm identity: 228
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 78

Conread position: 41-381
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 34

Conread position: 41-390
Cow position:
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 238

Conread position: 45-212
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 25

Conread position: 46-386
Cow position:
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 95

Conread position: 61-381
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 264, 132

Conread position: 73-381
Cow position:
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 165

Conread position: 87-255
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 50

Conread position: 88-381
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 98-348
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 50

Conread position: 99-381
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 14

Conread position: 107-386
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 113-381
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 25

Conread position: 129-381
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 61

Conread position: 131-381
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 111

Conread position: 146-386
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 42

Conread position: 149-386
Cow position:
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 93

Conread position: 152-374
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 64

Conread position: 153-386
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 84

Conread position: 171-386
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 71

Conread position: 178-386
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 64

Conread position: 183-357
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 62

Conread position: 199-383
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 42

Conread position: 211-381
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 30

Conread position: 242-387
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 28

Conread position: 256-381
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 80

Conread position: 259-386
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 80

Conread position: 640-846
Cow position:
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 643-842
Cow position:
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 645-840
Cow position:
Alignm length: 196
Alignm identity: 153
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 645-847
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 645-847
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 651-847
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 170, 58

Conread position: 653-847
Cow position:
Alignm length: 195
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.