Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-131 |
| Cow position: | chr20:10845765-10845632 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-226 |
| Cow position: | chr20:37580439-37580660 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 1-247 |
| Cow position: | chr20:3271059-3271302 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 152 |
| Conread position: | 1-348 |
| Cow position: | chr20:3679221-3678879 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 1-348 |
| Cow position: | chr20:8003869-8003522 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 78 |
| Conread position: | 1-349 |
| Cow position: | chr20:28161127-28161473 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 1-357 |
| Cow position: | chr20:2790547-2790196 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 112 |
| Conread position: | 1-357 |
| Cow position: | chr20:25850635-25850281 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-378 |
| Cow position: | chr20:21393951-21394328 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 241 |
| Conread position: | 1-381 |
| Cow position: | chr20:5535294-5535672 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 1-381 |
| Cow position: | chr20:8992865-8992484 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 1-381 |
| Cow position: | chr20:13763261-13763645 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr20:15097520-15097139 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 190 |
| Conread position: | 1-381 |
| Cow position: | chr20:16179459-16179077 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 188 |
| Conread position: | 1-381 |
| Cow position: | chr20:21914684-21915056 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr20:23469309-23468926 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 242 |
| Conread position: | 1-381 |
| Cow position: | chr20:23799242-23799620 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 142 |
| Conread position: | 1-381 |
| Cow position: | chr20:29948856-29949240 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 1-381 |
| Cow position: | chr20:30684677-30685058 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr20:35124852-35125232 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 1-386 |
| Cow position: | chr20:10840352-10839970 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 1-386 |
| Cow position: | chr20:13679686-13679305 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 189 |
| Conread position: | 1-386 |
| Cow position: | chr20:18314952-18314598 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 2-381 |
| Cow position: | chr20:10854986-10854612 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 2-381 |
| Cow position: | chr20:12438403-12438023 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 166 |
| Conread position: | 4-321 |
| Cow position: | chr20:18324815-18324509 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 102, 114 |
| Conread position: | 4-381 |
| Cow position: | chr20:15292367-15292742 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 53 |
| Conread position: | 5-321 |
| Cow position: | chr20:20754117-20753817 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 5-354 |
| Cow position: | chr20:42905575-42905911 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 5-381 |
| Cow position: | chr20:28565236-28564853 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 241 |
| Conread position: | 5-386 |
| Cow position: | chr20:27869558-27869946 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 6-165 |
| Cow position: | chr20:19352895-19353052 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 6-386 |
| Cow position: | chr20:823122-823501 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr20:19438294-19438665 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 150 |
| Conread position: | 6-386 |
| Cow position: | chr20:25961458-25961842 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 238 |
| Conread position: | 6-386 |
| Cow position: | chr20:38351033-38351415 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 153 |
| Conread position: | 12-235 |
| Cow position: | chr20:7115119-7114894 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 22-380 |
| Cow position: | chr20:8215896-8216252 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 144 |
| Conread position: | 23-327 |
| Cow position: | chr20:22716952-22716649 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 143 |
| Conread position: | 26-360 |
| Cow position: | chr20:28302959-28303299 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 213 |
| Conread position: | 27-346 |
| Cow position: | chr20:31377821-31377508 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 56 |
| Conread position: | 29-331 |
| Cow position: | chr20:24371408-24371111 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 32-381 |
| Cow position: | chr20:22697656-22697999 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 157 |
| Conread position: | 48-212 |
| Cow position: | chr20:38624411-38624575 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-381 |
| Cow position: | chr20:12568968-12569259 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 99-342 |
| Cow position: | chr20:15065723-15065964 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 160 |
| Conread position: | 106-386 |
| Cow position: | chr20:8974354-8974077 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 136 |
| Conread position: | 117-381 |
| Cow position: | chr20:14870476-14870211 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 118 |
| Conread position: | 127-357 |
| Cow position: | chr20:35105241-35105473 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 115 |
| Conread position: | 134-357 |
| Cow position: | chr20:24616370-24616140 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 146-381 |
| Cow position: | chr20:13434086-13433852 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 158-355 |
| Cow position: | chr20:19355292-19355484 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 78 |
| Conread position: | 165-375 |
| Cow position: | chr20:13495415-13495626 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 166-381 |
| Cow position: | chr20:17661557-17661339 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 640-847 |
| Cow position: | chr20:18314609-18314411 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 194, 51 |
| Conread position: | 644-846 |
| Cow position: | chr20:17661341-17661138 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 644-847 |
| Cow position: | chr20:13763643-13763841 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr20:15097141-15096944 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 651-847 |
| Cow position: | chr20:7113446-7113255 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.