Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-125
Cow position: chr22:1522313-1522438 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1-193
Cow position: chr22:15851617-15851810 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 182

Conread position: 1-235
Cow position: chr22:1322425-1322660 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 145

Conread position: 1-258
Cow position: chr22:46581292-46581034 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 237

Conread position: 1-260
Cow position: chr22:11781851-11781591 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 104, 175

Conread position: 1-265
Cow position: chr22:36269527-36269796 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 20

Conread position: 1-285
Cow position: chr22:37132719-37133007 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 240

Conread position: 1-298
Cow position: chr22:13918129-13918432 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 292

Conread position: 1-342
Cow position: chr22:3306101-3305759 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 244

Conread position: 1-377
Cow position: chr22:18816083-18815703 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position: chr22:35907091-35906727 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 1-381
Cow position: chr22:560402-560022 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 186

Conread position: 1-381
Cow position: chr22:1520712-1520341 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 127

Conread position: 1-381
Cow position: chr22:15313648-15313270 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 1-381
Cow position: chr22:17328437-17328053 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr22:19143389-19143011 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr22:21589627-21590016 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 1-381
Cow position: chr22:31313642-31314025 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 1-381
Cow position: chr22:31334735-31334356 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-381
Cow position: chr22:39469220-39468842 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 244

Conread position: 1-381
Cow position: chr22:44396745-44397129 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 1-381
Cow position: chr22:44934279-44934663 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-384
Cow position: chr22:34599707-34600076 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 106

Conread position: 1-386
Cow position: chr22:11032053-11032436 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 62

Conread position: 1-386
Cow position: chr22:37072775-37072397 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 72

Conread position: 1-386
Cow position: chr22:48004836-48005224 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 113

Conread position: 1-388
Cow position: chr22:6502832-6502449 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 78

Conread position: 2-223
Cow position: chr22:41239383-41239611 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 185

Conread position: 2-333
Cow position: chr22:13674495-13674169 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 59

Conread position: 2-345
Cow position: chr22:15955871-15955532 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 26

Conread position: 2-357
Cow position: chr22:46630746-46630388 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 2-377
Cow position: chr22:42991475-42991854 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 2-381
Cow position: chr22:36184060-36184436 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 71

Conread position: 2-381
Cow position: chr22:36861230-36860851 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 241

Conread position: 2-386
Cow position: chr22:8739916-8739529 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 52

Conread position: 2-387
Cow position: chr22:23853966-23854334 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 77

Conread position: 3-331
Cow position: chr22:14208114-14207785 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 231

Conread position: 4-342
Cow position: chr22:36580495-36580153 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 32

Conread position: 4-356
Cow position: chr22:36552150-36551802 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 80

Conread position: 5-292
Cow position: chr22:525388-525100 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-305
Cow position: chr22:5940984-5940690 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 11

Conread position: 5-371
Cow position: chr22:44352673-44352317 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 77

Conread position: 5-376
Cow position: chr22:24536055-24536422 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 26

Conread position: 5-381
Cow position: chr22:34168637-34169017 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-384
Cow position: chr22:12731369-12730987 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 6-143
Cow position: chr22:44490186-44490324 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 6-266
Cow position: chr22:16814187-16814448 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 231

Conread position: 6-384
Cow position: chr22:326863-326487 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 89

Conread position: 6-386
Cow position: chr22:537402-537784 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 38

Conread position: 6-386
Cow position: chr22:693924-694309 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 6-386
Cow position: chr22:1879094-1879477 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-386
Cow position: chr22:3278055-3277674 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr22:5232981-5232596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr22:6020964-6021346 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position: chr22:10909532-10909153 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr22:18027580-18027965 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr22:24950397-24950781 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position: chr22:27284333-27284710 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position: chr22:27309472-27309092 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 27

Conread position: 6-386
Cow position: chr22:35672055-35671671 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 6-386
Cow position: chr22:44369324-44368943 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-387
Cow position: chr22:5308408-5308785 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 175

Conread position: 8-386
Cow position: chr22:20240539-20240159 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 59

Conread position: 11-721
Cow position: chr22:1269481-1268774 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 136

Conread position: 21-211
Cow position: chr22:5932510-5932317 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 149

Conread position: 41-229
Cow position: chr22:36275772-36275961 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 32

Conread position: 41-345
Cow position: chr22:8897485-8897799 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 23

Conread position: 46-297
Cow position: chr22:35942436-35942188 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 30

Conread position: 84-386
Cow position: chr22:14629796-14630102 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 89-348
Cow position: chr22:8649345-8649091 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 235, 10

Conread position: 100-386
Cow position: chr22:42988958-42989247 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 136

Conread position: 109-343
Cow position: chr22:1282950-1282720 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 212, 100

Conread position: 119-381
Cow position: chr22:46522071-46521810 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 28

Conread position: 126-381
Cow position: chr22:44457477-44457734 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 111

Conread position: 128-386
Cow position: chr22:44491457-44491717 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 109

Conread position: 129-343
Cow position: chr22:4230409-4230194 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 106

Conread position: 142-330
Cow position: chr22:11640185-11640001 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 95

Conread position: 151-334
Cow position: chr22:2627328-2627147 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 86

Conread position: 226-386
Cow position: chr22:11804535-11804373 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 92, 15

Conread position: 234-381
Cow position: chr22:9287117-9287267 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 245-381
Cow position: chr22:36129454-36129593 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 94

Conread position: 643-811
Cow position: chr22:44368951-44368784 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 644-844
Cow position: chr22:34169015-34169214 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:1520343-1520145 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr22:6332396-6332589 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 644-847
Cow position: chr22:31334358-31334157 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:36129591-36129793 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:36860853-36860654 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr22:37292993-37292787 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 71

Conread position: 645-846
Cow position: chr22:42991857-42992057 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 650-847
Cow position: chr22:18815695-18815502 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 660-847
Cow position: chr22:17327762-17327576 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 182, 55

Show alignments to all cow chromosomes.