Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-111 |
| Cow position: | chr23:30635998-30635888 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-192 |
| Cow position: | chr23:2026816-2026620 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-209 |
| Cow position: | chr23:2574837-2575047 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 1-250 |
| Cow position: | chr23:25683738-25683488 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 192 |
| Conread position: | 1-256 |
| Cow position: | chr23:31594944-31594693 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 1-287 |
| Cow position: | chr23:29452014-29451734 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 101 |
| Conread position: | 1-290 |
| Cow position: | chr23:11778791-11779076 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-322 |
| Cow position: | chr23:2341392-2341714 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 1-341 |
| Cow position: | chr23:14965449-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 1-354 |
| Cow position: | chr23:15877464-15877116 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 93 |
| Conread position: | 1-356 |
| Cow position: | chr23:7046357-7045990 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 191 |
| Conread position: | 1-356 |
| Cow position: | chr23:14262161-14262517 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 1-357 |
| Cow position: | chr23:20155913-20155554 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 243 |
| Conread position: | 1-381 |
| Cow position: | chr23:967047-966659 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 250 |
| Conread position: | 1-381 |
| Cow position: | chr23:2716693-2717072 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 1-381 |
| Cow position: | chr23:4640321-4639943 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 1-381 |
| Cow position: | chr23:15177374-15177754 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 1-381 |
| Cow position: | chr23:19489844-19490223 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr23:27399806-27400186 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 1-381 |
| Cow position: | chr23:28913696-28914075 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 1-386 |
| Cow position: | chr23:2781911-2781531 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 165 |
| Conread position: | 1-386 |
| Cow position: | chr23:3014695-3015084 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 243 |
| Conread position: | 1-386 |
| Cow position: | chr23:4888975-4889369 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 146 |
| Conread position: | 1-396 |
| Cow position: | chr23:2757897-2758296 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 231 |
| Conread position: | 2-229 |
| Cow position: | chr23:22146950-22146721 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 2-381 |
| Cow position: | chr23:5874338-5873970 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 2-381 |
| Cow position: | chr23:15219596-15219225 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 4-356 |
| Cow position: | chr23:26836970-26837310 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 4-361 |
| Cow position: | chr23:13509956-13510320 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 221 |
| Conread position: | 5-218 |
| Cow position: | chr23:15525918-15526132 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 70 |
| Conread position: | 5-232 |
| Cow position: | chr23:17185997-17186227 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 141, 87 |
| Conread position: | 5-357 |
| Cow position: | chr23:4752905-4753250 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 13 |
| Conread position: | 5-381 |
| Cow position: | chr23:4510384-4510746 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 112 |
| Conread position: | 5-381 |
| Cow position: | chr23:36031069-36030694 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 6-304 |
| Cow position: | chr23:4434760-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-307 |
| Cow position: | chr23:17786021-17785719 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-366 |
| Cow position: | chr23:20302512-20302865 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 206 |
| Conread position: | 6-376 |
| Cow position: | chr23:16616538-16616167 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-384 |
| Cow position: | chr23:19950285-19949915 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 6-386 |
| Cow position: | chr23:2312938-2312558 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 236 |
| Conread position: | 6-386 |
| Cow position: | chr23:4360130-4360492 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 139 |
| Conread position: | 6-386 |
| Cow position: | chr23:23830267-23830645 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 6-386 |
| Cow position: | chr23:28217591-28217975 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr23:31447116-31447500 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 8-333 |
| Cow position: | chr23:14974254-14973925 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 167 |
| Conread position: | 12-381 |
| Cow position: | chr23:16615123-16614757 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 20-358 |
| Cow position: | chr23:14779059-14778726 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 21-377 |
| Cow position: | chr23:4817338-4817695 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 217 |
| Conread position: | 22-386 |
| Cow position: | chr23:1024700-1024327 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 23-381 |
| Cow position: | chr23:1402175-1401823 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 27-357 |
| Cow position: | chr23:2794907-2794577 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 27-386 |
| Cow position: | chr23:14948413-14948055 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 181, 72 |
| Conread position: | 68-377 |
| Cow position: | chr23:28077736-28078044 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 68-381 |
| Cow position: | chr23:27970903-27971220 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 170 |
| Conread position: | 68-381 |
| Cow position: | chr23:28025032-28025349 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 170 |
| Conread position: | 68-386 |
| Cow position: | chr23:28108025-28108335 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 73-350 |
| Cow position: | chr23:31649573-31649301 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 80-387 |
| Cow position: | chr23:28368145-28367834 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 163 |
| Conread position: | 86-328 |
| Cow position: | chr23:619051-618821 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 93-365 |
| Cow position: | chr23:7364332-7364589 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 99-317 |
| Cow position: | chr23:22874787-22874579 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 116-375 |
| Cow position: | chr23:3861311-3861049 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 122 |
| Conread position: | 128-358 |
| Cow position: | chr23:16499021-16498790 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 190, 108 |
| Conread position: | 153-377 |
| Cow position: | chr23:3880626-3880404 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 167-361 |
| Cow position: | chr23:12887514-12887329 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 175-381 |
| Cow position: | chr23:2026610-2026400 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 182-386 |
| Cow position: | chr23:3706599-3706805 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 198-334 |
| Cow position: | chr23:2575462-2575596 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 201-321 |
| Cow position: | chr23:38794702-38794822 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 278-386 |
| Cow position: | chr23:10157760-10157871 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 636-844 |
| Cow position: | chr23:27400176-27400383 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 644-841 |
| Cow position: | chr23:11779464-11779656 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-846 |
| Cow position: | chr23:2026402-2026201 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr23:4639945-4639746 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 644-847 |
| Cow position: | chr23:4817699-4817900 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 644-847 |
| Cow position: | chr23:15219227-15219024 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 71 |
| Conread position: | 645-769 |
| Cow position: | chr23:14964796-14964672 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 645-847 |
| Cow position: | chr23:3880401-3880203 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 650-847 |
| Cow position: | chr23:20155536-20155340 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.