Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-143 |
| Cow position: | chr25:33665334-33665193 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 1-263 |
| Cow position: | chr25:9544407-9544667 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 77 |
| Conread position: | 1-335 |
| Cow position: | chr25:8675260-8675598 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-341 |
| Cow position: | chr25:18889670-18889330 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-342 |
| Cow position: | chr25:12942355-12942011 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-347 |
| Cow position: | chr25:11932757-11932412 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 181 |
| Conread position: | 1-361 |
| Cow position: | chr25:18254633-18254280 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 97, 26 |
| Conread position: | 1-376 |
| Cow position: | chr25:33244608-33244965 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 43 |
| Conread position: | 1-381 |
| Cow position: | chr25:13781375-13781759 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr25:18303744-18304119 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 241 |
| Conread position: | 1-381 |
| Cow position: | chr25:24659598-24659971 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 236 |
| Conread position: | 1-381 |
| Cow position: | chr25:34346672-34346289 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 92 |
| Conread position: | 2-179 |
| Cow position: | chr25:18094546-18094722 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 2-328 |
| Cow position: | chr25:18422373-18422698 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 108, 80 |
| Conread position: | 2-356 |
| Cow position: | chr25:16552486-16552133 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 2-377 |
| Cow position: | chr25:26879538-26879913 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 3-259 |
| Cow position: | chr25:17560290-17560034 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 145 |
| Conread position: | 4-171 |
| Cow position: | chr25:23344552-23344384 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 4-349 |
| Cow position: | chr25:27365205-27365553 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 5-349 |
| Cow position: | chr25:18274633-18274289 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 236 |
| Conread position: | 5-380 |
| Cow position: | chr25:34014140-34013755 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 341 |
| Conread position: | 6-134 |
| Cow position: | chr25:35362086-35361957 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 6-346 |
| Cow position: | chr25:19917427-19917770 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 232 |
| Conread position: | 6-381 |
| Cow position: | chr25:18194755-18194378 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 182 |
| Conread position: | 6-386 |
| Cow position: | chr25:6172246-6172630 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 231 |
| Conread position: | 6-386 |
| Cow position: | chr25:13550687-13550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr25:17589211-17588826 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 238 |
| Conread position: | 6-386 |
| Cow position: | chr25:32580308-32580685 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 17-384 |
| Cow position: | chr25:33258021-33258367 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 18-386 |
| Cow position: | chr25:27022208-27021854 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 131 |
| Conread position: | 25-381 |
| Cow position: | chr25:22147907-22148265 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 92 |
| Conread position: | 27-333 |
| Cow position: | chr25:20775556-20775254 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 211 |
| Conread position: | 27-356 |
| Cow position: | chr25:12758718-12758395 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 176, 94 |
| Conread position: | 34-381 |
| Cow position: | chr25:26279624-26279969 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 203 |
| Conread position: | 36-376 |
| Cow position: | chr25:40918780-40918440 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 39-380 |
| Cow position: | chr25:14958468-14958127 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 262 |
| Conread position: | 48-396 |
| Cow position: | chr25:18153042-18153386 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 49-386 |
| Cow position: | chr25:18175670-18176004 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 63 |
| Conread position: | 65-376 |
| Cow position: | chr25:39558013-39557708 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 73-381 |
| Cow position: | chr25:20630047-20630355 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 80-374 |
| Cow position: | chr25:8176927-8176634 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 116-346 |
| Cow position: | chr25:46206-46436 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 224, 118 |
| Conread position: | 145-380 |
| Cow position: | chr25:25507190-25507428 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 97 |
| Conread position: | 147-386 |
| Cow position: | chr25:33664732-33664489 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 644-847 |
| Cow position: | chr25:22148263-22148465 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr25:26279967-26280169 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr25:34346291-34346089 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 651-846 |
| Cow position: | chr25:25507434-25507628 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.