Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-312 |
| Cow position: | chr27:15277767-15277455 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 1-381 |
| Cow position: | chr27:893510-893894 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr27:1209654-1210036 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 163 |
| Conread position: | 1-381 |
| Cow position: | chr27:5911164-5911548 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 236 |
| Conread position: | 1-381 |
| Cow position: | chr27:9330024-9330408 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 237 |
| Conread position: | 1-381 |
| Cow position: | chr27:9992900-9992517 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 1-381 |
| Cow position: | chr27:14460154-14459770 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-381 |
| Cow position: | chr27:23335466-23335847 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 236 |
| Conread position: | 1-420 |
| Cow position: | chr27:15638067-15637645 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 2-381 |
| Cow position: | chr27:28078747-28079124 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 143 |
| Conread position: | 4-381 |
| Cow position: | chr27:6014101-6014461 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 263, 80 |
| Conread position: | 5-309 |
| Cow position: | chr27:3643939-3643630 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 213 |
| Conread position: | 5-386 |
| Cow position: | chr27:26555355-26554977 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 6-381 |
| Cow position: | chr27:25804596-25804236 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 6-386 |
| Cow position: | chr27:15541630-15542014 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr27:16034093-16033709 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr27:27752895-27752525 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 161 |
| Conread position: | 18-381 |
| Cow position: | chr27:16612599-16612237 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 22-249 |
| Cow position: | chr27:27663265-27663493 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 216 |
| Conread position: | 22-381 |
| Cow position: | chr27:15037268-15036907 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 221 |
| Conread position: | 22-381 |
| Cow position: | chr27:15046493-15046852 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 27-214 |
| Cow position: | chr27:14660107-14660294 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 29-215 |
| Cow position: | chr27:28080628-28080808 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 33-217 |
| Cow position: | chr27:22318080-22318266 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 35-274 |
| Cow position: | chr27:27498925-27499158 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 35-381 |
| Cow position: | chr27:26325403-26325753 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 203 |
| Conread position: | 48-375 |
| Cow position: | chr27:17321669-17321346 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 33 |
| Conread position: | 80-381 |
| Cow position: | chr27:15123315-15123614 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 97-381 |
| Cow position: | chr27:27196208-27195931 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 117, 67 |
| Conread position: | 101-346 |
| Cow position: | chr27:17421954-17422193 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 215, 92 |
| Conread position: | 224-382 |
| Cow position: | chr27:1139111-1139271 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 226-386 |
| Cow position: | chr27:11095330-11095492 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 257-381 |
| Cow position: | chr27:27663525-27663652 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 644-793 |
| Cow position: | chr27:893892-894040 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 644-847 |
| Cow position: | chr27:3234858-3234661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 644-847 |
| Cow position: | chr27:15036909-15036710 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr27:26325751-26325953 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 652-847 |
| Cow position: | chr27:9992511-9992320 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 652-847 |
| Cow position: | chr27:15636661-15636467 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.