Cow genome map
Conread name: | LyN1-MLN01E060086 |
Conread position: | 1-143 |
Cow position: | chr28:14705324-14705181 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 121 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 1-160 |
Cow position: | chr28:10617480-10617322 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 104, 34 |
Conread position: | 1-235 |
Cow position: | chr28:29820081-29820316 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 218 |
Conread position: | 1-266 |
Cow position: | chr28:10581638-10581371 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 1-293 |
Cow position: | chr28:2083941-2084229 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 78 |
Conread position: | 1-332 |
Cow position: | chr28:34594326-34594660 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 72 |
Conread position: | 1-351 |
Cow position: | chr28:5751358-5751009 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 166 |
Conread position: | 1-352 |
Cow position: | chr28:5813356-5813712 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 241 |
Conread position: | 1-361 |
Cow position: | chr28:2988893-2988533 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 21 |
Conread position: | 1-365 |
Cow position: | chr28:10497668-10497312 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 106 |
Conread position: | 1-377 |
Cow position: | chr28:1814520-1814142 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 105 |
Conread position: | 1-377 |
Cow position: | chr28:5937823-5938206 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 134 |
Conread position: | 1-377 |
Cow position: | chr28:7002337-7002718 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 1-380 |
Cow position: | chr28:12150650-12151030 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 243 |
Conread position: | 1-381 |
Cow position: | chr28:1167535-1167151 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 242 |
Conread position: | 1-381 |
Cow position: | chr28:1505212-1505595 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 237 |
Conread position: | 1-381 |
Cow position: | chr28:5113951-5113570 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 237 |
Conread position: | 1-381 |
Cow position: | chr28:12409881-12409500 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 242 |
Conread position: | 1-381 |
Cow position: | chr28:17388830-17389208 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 116 |
Conread position: | 1-381 |
Cow position: | chr28:22260804-22260426 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 237 |
Conread position: | 1-381 |
Cow position: | chr28:26425904-26425525 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 242 |
Conread position: | 1-381 |
Cow position: | chr28:32792033-32791649 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 163 |
Conread position: | 1-381 |
Cow position: | chr28:33252659-33253029 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 116 |
Conread position: | 1-384 |
Cow position: | chr28:24667957-24668347 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 78 |
Conread position: | 1-386 |
Cow position: | chr28:5566492-5566885 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 241 |
Conread position: | 2-235 |
Cow position: | chr28:14913864-14914099 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 102, 131 |
Conread position: | 2-276 |
Cow position: | chr28:6656173-6655890 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 57, 41 |
Conread position: | 2-365 |
Cow position: | chr28:5798095-5798453 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 10 |
Conread position: | 5-268 |
Cow position: | chr28:3020399-3020139 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 143 |
Conread position: | 5-318 |
Cow position: | chr28:31140434-31140120 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 210 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 5-347 |
Cow position: | chr28:782744-783087 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 158 |
Conread position: | 5-377 |
Cow position: | chr28:7740830-7741193 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 232 |
Conread position: | 5-381 |
Cow position: | chr28:3191895-3191525 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 74 |
Conread position: | 5-381 |
Cow position: | chr28:7789600-7789221 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 74 |
Conread position: | 5-381 |
Cow position: | chr28:13460320-13460699 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 177 |
Conread position: | 5-381 |
Cow position: | chr28:17666947-17666576 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 112 |
Conread position: | 5-385 |
Cow position: | chr28:10071635-10072005 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 68 |
Conread position: | 5-386 |
Cow position: | chr28:1387053-1386670 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 148 |
Conread position: | 6-126 |
Cow position: | chr28:21359690-21359811 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 6-250 |
Cow position: | chr28:485217-484972 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-300 |
Cow position: | chr28:5801346-5801640 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 206 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 92, 73 |
Conread position: | 6-327 |
Cow position: | chr28:10229870-10229555 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 220 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 63, 178 |
Conread position: | 6-386 |
Cow position: | chr28:1953475-1953861 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 234 |
Conread position: | 6-386 |
Cow position: | chr28:2724577-2724193 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr28:6538916-6538533 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr28:6779991-6779608 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-386 |
Cow position: | chr28:22233054-22232673 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-387 |
Cow position: | chr28:7822603-7822988 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-387 |
Cow position: | chr28:14750892-14751273 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 61 |
Conread position: | 13-378 |
Cow position: | chr28:10647026-10646677 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 247 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 92, 13 |
Conread position: | 16-257 |
Cow position: | chr28:8720937-8720694 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 223 |
Conread position: | 18-202 |
Cow position: | chr28:24588447-24588634 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 18-384 |
Cow position: | chr28:24589209-24589581 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 222 |
Conread position: | 22-381 |
Cow position: | chr28:18520078-18519719 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 115 |
Conread position: | 27-386 |
Cow position: | chr28:14195320-14194960 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 252 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 66, 170 |
Conread position: | 29-217 |
Cow position: | chr28:24704874-24705057 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 178, 81 |
Conread position: | 35-364 |
Cow position: | chr28:33259022-33259346 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 217 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 209, 78 |
Conread position: | 39-353 |
Cow position: | chr28:26489686-26490001 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 220 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 62, 198 |
Conread position: | 41-325 |
Cow position: | chr28:18100836-18100556 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 189 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 101, 167 |
Conread position: | 41-345 |
Cow position: | chr28:24304616-24304319 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 200 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 104, 66 |
Conread position: | 42-384 |
Cow position: | chr28:5765150-5765482 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 31 |
Conread position: | 44-216 |
Cow position: | chr28:7882008-7881836 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 140 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 61, 80 |
Conread position: | 61-215 |
Cow position: | chr28:7880929-7881084 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 89-377 |
Cow position: | chr28:8379268-8379559 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 148 |
Conread position: | 91-333 |
Cow position: | chr28:7810937-7811165 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 174 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 111, 78 |
Conread position: | 117-386 |
Cow position: | chr28:21359939-21360211 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 125 |
Conread position: | 128-356 |
Cow position: | chr28:29455011-29454783 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 146-381 |
Cow position: | chr28:14704897-14704662 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 25 |
Conread position: | 154-356 |
Cow position: | chr28:10617291-10617094 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 55, 83 |
Conread position: | 165-386 |
Cow position: | chr28:18147240-18147021 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 152, 37 |
Conread position: | 222-386 |
Cow position: | chr28:29820570-29820736 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 95, 19 |
Conread position: | 232-381 |
Cow position: | chr28:32330168-32330018 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 9, 108 |
Conread position: | 257-386 |
Cow position: | chr28:7881843-7881715 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 109, 26 |
Conread position: | 265-386 |
Cow position: | chr28:17732450-17732326 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 55, 73 |
Conread position: | 273-386 |
Cow position: | chr28:8720331-8720220 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 96, 42 |
Conread position: | 640-843 |
Cow position: | chr28:10071995-10072196 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 640-844 |
Cow position: | chr28:25169354-25169154 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 66, 81 |
Conread position: | 640-847 |
Cow position: | chr28:3019998-3019792 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 640-847 |
Cow position: | chr28:7789227-7789025 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 640-847 |
Cow position: | chr28:33253023-33253229 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 162 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 644-839 |
Cow position: | chr28:12409502-12409311 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 644-847 |
Cow position: | chr28:783400-783598 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 644-847 |
Cow position: | chr28:1167153-1166951 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 161 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 111, 65 |
Conread position: | 644-847 |
Cow position: | chr28:17666578-17666381 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 644-847 |
Cow position: | chr28:32791651-32791450 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 645-847 |
Cow position: | chr28:5938209-5938410 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 159 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 650-847 |
Cow position: | chr28:8379786-8379981 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 157 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 651-844 |
Cow position: | chr28:10646670-10646477 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 54, 63 |
Show alignments to all cow chromosomes.