Cow genome map


           Conread name:
           LyN1-MLN01E060086
        

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 218
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 78
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 72
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 166
               

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 241
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 106
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 105
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 134
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 243
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 242
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 242
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 116
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 242
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 163
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 116
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 78
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 241
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               102, 131
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               2-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 10
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 143
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               5-347
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 158
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 232
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 177
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               5-385
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 148
               

               Conread position:
               6-126
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-300
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               92, 73
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 178
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 234
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 61
               

               Conread position:
               13-378
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               16-257
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 223
               

               Conread position:
               18-202
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               18-384
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 222
               

               Conread position:
               22-381
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               27-386
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 170
               

               Conread position:
               29-217
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               178, 81
               

               Conread position:
               35-364
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               209, 78
               

               Conread position:
               39-353
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 198
               

               Conread position:
               41-325
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 167
               

               Conread position:
               41-345
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 66
               

               Conread position:
               42-384
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               44-216
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               61-215
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               89-377
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 148
               

               Conread position:
               91-333
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               111, 78
               

               Conread position:
               117-386
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 125
               

               Conread position:
               128-356
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 98
               

               Conread position:
               146-381
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 25
               

               Conread position:
               154-356
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               165-386
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               152, 37
               

               Conread position:
               222-386
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               232-381
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               257-386
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               265-386
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               273-386
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               640-843
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               640-844
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 81
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               644-839
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               111, 65
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               645-847
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               650-847
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               651-844
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               54, 63
               
Show alignments to all cow chromosomes.