Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-206
Cow position: chr29:42650578-42650785 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-225
Cow position: chr29:410212-409988 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 1-249
Cow position: chr29:6266188-6265938 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 1-335
Cow position: chr29:42802438-42802776 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 242

Conread position: 1-358
Cow position: chr29:802613-802264 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-375
Cow position: chr29:15949237-15948872 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 78

Conread position: 1-376
Cow position: chr29:9961599-9961972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 75

Conread position: 1-377
Cow position: chr29:45460029-45460408 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 1-381
Cow position: chr29:2100158-2100541 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:2690213-2690597 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:2841060-2840687 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 69

Conread position: 1-381
Cow position: chr29:7430906-7430527 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:10647938-10647560 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:10823656-10823283 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 160

Conread position: 1-381
Cow position: chr29:16022843-16023229 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 239

Conread position: 1-381
Cow position: chr29:21426717-21426330 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:25932230-25931847 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-381
Cow position: chr29:26164510-26164136 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 242

Conread position: 1-381
Cow position: chr29:34799497-34799114 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-381
Cow position: chr29:40502671-40502287 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 1-381
Cow position: chr29:43322867-43323250 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 74

Conread position: 1-381
Cow position: chr29:45587055-45586671 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 238

Conread position: 1-384
Cow position: chr29:14085822-14085436 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-386
Cow position: chr29:39079398-39079010 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 127

Conread position: 1-396
Cow position: chr29:32540123-32540515 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 2-248
Cow position: chr29:6212839-6213097 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 189

Conread position: 2-381
Cow position: chr29:5957917-5958293 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 4-384
Cow position: chr29:5982400-5982018 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 5-312
Cow position: chr29:19653425-19653740 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 5-355
Cow position: chr29:23976157-23976504 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 5-381
Cow position: chr29:19622931-19622552 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr29:20251475-20251855 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-381
Cow position: chr29:38227296-38227669 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 5-386
Cow position: chr29:9643441-9643066 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 74

Conread position: 6-318
Cow position: chr29:16110727-16111041 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 63

Conread position: 6-343
Cow position: chr29:7844642-7844982 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-343
Cow position: chr29:13582379-13582714 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 162

Conread position: 6-376
Cow position: chr29:16016460-16016091 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 29

Conread position: 6-384
Cow position: chr29:610301-609922 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 112

Conread position: 6-386
Cow position: chr29:669746-669363 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 170

Conread position: 6-386
Cow position: chr29:15894539-15894155 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position: chr29:15968550-15968166 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 6-386
Cow position: chr29:18856632-18856249 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 155

Conread position: 6-386
Cow position: chr29:27250031-27249648 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 6-386
Cow position: chr29:27980608-27980230 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 6-386
Cow position: chr29:31181726-31182099 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position: chr29:34925790-34926173 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 6-386
Cow position: chr29:35297180-35297548 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 233

Conread position: 6-387
Cow position: chr29:19885381-19885763 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 94

Conread position: 12-268
Cow position: chr29:2950945-2950692 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 83

Conread position: 12-380
Cow position: chr29:105350-105725 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 233

Conread position: 13-381
Cow position: chr29:14586241-14586613 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 21-226
Cow position: chr29:9854176-9853961 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 169

Conread position: 22-381
Cow position: chr29:48139-47777 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 216

Conread position: 22-381
Cow position: chr29:35263038-35263383 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 17

Conread position: 23-332
Cow position: chr29:21459617-21459937 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 31

Conread position: 27-381
Cow position: chr29:19597916-19597564 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 8

Conread position: 42-380
Cow position: chr29:9619770-9620112 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 58-256
Cow position: chr29:3045996-3046193 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 120

Conread position: 70-381
Cow position: chr29:7856885-7857193 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 46

Conread position: 73-364
Cow position: chr29:251152-251450 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 104-331
Cow position: chr29:7086989-7087216 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 212, 97

Conread position: 127-386
Cow position: chr29:32559322-32559059 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 152-387
Cow position: chr29:24336321-24336091 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 73

Conread position: 167-365
Cow position: chr29:16173854-16173656 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 75

Conread position: 181-381
Cow position: chr29:32803929-32804130 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 56

Conread position: 252-381
Cow position: chr29:6265716-6265584 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 87

Conread position: 273-386
Cow position: chr29:8664104-8664219 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 66

Conread position: 273-386
Cow position: chr29:15785381-15785265 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 65

Conread position: 634-847
Cow position: chr29:14210890-14210678 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 76

Conread position: 635-846
Cow position: chr29:10647572-10647357 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 81

Conread position: 640-833
Cow position: chr29:2949652-2949469 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 80

Conread position: 640-847
Cow position: chr29:6265590-6265384 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 640-847
Cow position: chr29:41367001-41366799 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 644-771
Cow position: chr29:16344928-16345054 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 644-797
Cow position: chr29:38654959-38654807 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 644-841
Cow position: chr29:38227667-38227863 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr29:26164138-26163937 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position: chr29:40502289-40502088 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:2690595-2690802 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 71

Conread position: 644-847
Cow position: chr29:2840689-2840487 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:7430529-7430328 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position: chr29:10823285-10823083 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 644-847
Cow position: chr29:14586611-14586811 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 644-847
Cow position: chr29:25931849-25931650 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 644-847
Cow position: chr29:32540783-32540984 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position: chr29:35815287-35815085 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 645-844
Cow position: chr29:23976813-23977011 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 650-826
Cow position: chr29:2748557-2748383 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 67

Conread position: 650-845
Cow position: chr29:39079011-39078817 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 650-847
Cow position: chr29:2100545-2100739 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 650-847
Cow position: chr29:16023233-16023429 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.