Cow genome map
| Conread name: | LyN1-MLN01E060086 |
| Conread position: | 1-117 |
| Cow position: | chr3:2710714-2710597 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-247 |
| Cow position: | chr3:77424035-77424284 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-264 |
| Cow position: | chr3:16073962-16074215 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 1-264 |
| Cow position: | chr3:19721939-19721671 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 97, 82 |
| Conread position: | 1-267 |
| Cow position: | chr3:36881690-36881421 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 245 |
| Conread position: | 1-324 |
| Cow position: | chr3:5995471-5995150 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 150 |
| Conread position: | 1-354 |
| Cow position: | chr3:594807-595161 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 1-356 |
| Cow position: | chr3:15178932-15179281 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 1-365 |
| Cow position: | chr3:23213841-23213480 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 1-367 |
| Cow position: | chr3:49272260-49271898 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 236 |
| Conread position: | 1-374 |
| Cow position: | chr3:21259686-21259320 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 172, 19 |
| Conread position: | 1-376 |
| Cow position: | chr3:42631650-42632022 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 1-376 |
| Cow position: | chr3:50011901-50012270 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 83 |
| Conread position: | 1-377 |
| Cow position: | chr3:57484499-57484122 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 116 |
| Conread position: | 1-380 |
| Cow position: | chr3:5953956-5953574 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 188 |
| Conread position: | 1-381 |
| Cow position: | chr3:7481002-7480623 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 116 |
| Conread position: | 1-381 |
| Cow position: | chr3:10239884-10240266 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 1-381 |
| Cow position: | chr3:19756728-19756343 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 243 |
| Conread position: | 1-381 |
| Cow position: | chr3:21182456-21182083 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 1-381 |
| Cow position: | chr3:23290112-23289728 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 165 |
| Conread position: | 1-381 |
| Cow position: | chr3:34030668-34030287 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 236 |
| Conread position: | 1-381 |
| Cow position: | chr3:42432463-42432826 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 226 |
| Conread position: | 1-381 |
| Cow position: | chr3:48230225-48229856 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 62 |
| Conread position: | 1-381 |
| Cow position: | chr3:49334015-49334394 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 1-381 |
| Cow position: | chr3:49544980-49544601 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 133 |
| Conread position: | 1-381 |
| Cow position: | chr3:52863905-52863524 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 1-381 |
| Cow position: | chr3:63003316-63002941 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 1-381 |
| Cow position: | chr3:66620403-66620789 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 239 |
| Conread position: | 1-381 |
| Cow position: | chr3:78027179-78026812 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 88 |
| Conread position: | 1-382 |
| Cow position: | chr3:18811731-18812116 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 1-384 |
| Cow position: | chr3:49678022-49678411 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 181 |
| Conread position: | 1-386 |
| Cow position: | chr3:6686038-6686420 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 1-386 |
| Cow position: | chr3:18463336-18462957 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 1-396 |
| Cow position: | chr3:18542177-18541782 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 2-222 |
| Cow position: | chr3:74439528-74439750 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 2-349 |
| Cow position: | chr3:6878824-6878496 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 2-376 |
| Cow position: | chr3:32841793-32841418 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 2-378 |
| Cow position: | chr3:46502765-46503143 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 238 |
| Conread position: | 2-381 |
| Cow position: | chr3:2907534-2907164 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 2-381 |
| Cow position: | chr3:32616771-32616386 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 2-381 |
| Cow position: | chr3:53515844-53516220 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 2-381 |
| Cow position: | chr3:56340195-56339811 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 240 |
| Conread position: | 2-386 |
| Cow position: | chr3:19939104-19939503 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 179 |
| Conread position: | 2-386 |
| Cow position: | chr3:58947857-58948227 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 115 |
| Conread position: | 4-259 |
| Cow position: | chr3:66991324-66991571 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 97, 172 |
| Conread position: | 4-264 |
| Cow position: | chr3:21304563-21304304 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 4-356 |
| Cow position: | chr3:31415773-31416113 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 4-362 |
| Cow position: | chr3:12679789-12679428 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 97, 188 |
| Conread position: | 4-379 |
| Cow position: | chr3:83233003-83232636 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 95 |
| Conread position: | 4-381 |
| Cow position: | chr3:42052916-42052538 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 4-381 |
| Cow position: | chr3:42995456-42995067 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 242 |
| Conread position: | 4-382 |
| Cow position: | chr3:70887368-70887742 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 190 |
| Conread position: | 5-134 |
| Cow position: | chr3:48060596-48060466 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 5-199 |
| Cow position: | chr3:24591084-24590898 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 5-203 |
| Cow position: | chr3:64357609-64357417 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 153 |
| Conread position: | 5-215 |
| Cow position: | chr3:77548952-77549158 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 5-257 |
| Cow position: | chr3:70097456-70097709 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 5-265 |
| Cow position: | chr3:75047563-75047313 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 232, 51 |
| Conread position: | 5-377 |
| Cow position: | chr3:5883773-5884145 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 5-381 |
| Cow position: | chr3:30314801-30315169 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 62 |
| Conread position: | 5-381 |
| Cow position: | chr3:40823621-40823998 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 233 |
| Conread position: | 5-381 |
| Cow position: | chr3:45774178-45773792 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 5-381 |
| Cow position: | chr3:45895323-45894945 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 5-381 |
| Cow position: | chr3:45974732-45975108 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 5-381 |
| Cow position: | chr3:49137304-49136933 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 121 |
| Conread position: | 5-381 |
| Cow position: | chr3:59861600-59861980 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 233 |
| Conread position: | 5-381 |
| Cow position: | chr3:64017132-64016755 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 5-381 |
| Cow position: | chr3:72630303-72630681 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 232 |
| Conread position: | 5-381 |
| Cow position: | chr3:75040935-75040555 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 6-229 |
| Cow position: | chr3:7169021-7169247 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 6-317 |
| Cow position: | chr3:51940184-51939885 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 208, 51 |
| Conread position: | 6-349 |
| Cow position: | chr3:18356268-18355926 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 233 |
| Conread position: | 6-358 |
| Cow position: | chr3:29331042-29330684 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-359 |
| Cow position: | chr3:1516384-1516740 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-365 |
| Cow position: | chr3:49613748-49613390 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 239 |
| Conread position: | 6-380 |
| Cow position: | chr3:46861074-46860697 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-381 |
| Cow position: | chr3:32622808-32622437 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 236 |
| Conread position: | 6-382 |
| Cow position: | chr3:68873526-68873146 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 233 |
| Conread position: | 6-386 |
| Cow position: | chr3:2917690-2918073 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 6-386 |
| Cow position: | chr3:3523250-3523632 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 160 |
| Conread position: | 6-386 |
| Cow position: | chr3:6782613-6782983 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 176 |
| Conread position: | 6-386 |
| Cow position: | chr3:14439532-14439152 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr3:18859643-18860023 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 6-386 |
| Cow position: | chr3:19736809-19737193 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 231 |
| Conread position: | 6-386 |
| Cow position: | chr3:19878886-19879265 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr3:20380772-20381153 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr3:22336117-22336501 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 232 |
| Conread position: | 6-386 |
| Cow position: | chr3:24314696-24315079 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 231 |
| Conread position: | 6-386 |
| Cow position: | chr3:37625209-37625581 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 6-386 |
| Cow position: | chr3:37969277-37969655 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 6-386 |
| Cow position: | chr3:40339883-40339502 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 236 |
| Conread position: | 6-386 |
| Cow position: | chr3:41211508-41211123 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 234 |
| Conread position: | 6-386 |
| Cow position: | chr3:45032970-45033358 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 6-386 |
| Cow position: | chr3:46679660-46680040 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 183 |
| Conread position: | 6-386 |
| Cow position: | chr3:50915561-50915944 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 161 |
| Conread position: | 6-386 |
| Cow position: | chr3:64027857-64027473 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 237 |
| Conread position: | 6-386 |
| Cow position: | chr3:64650855-64651239 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 232 |
| Conread position: | 6-386 |
| Cow position: | chr3:66890734-66890353 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 233 |
| Conread position: | 6-386 |
| Cow position: | chr3:68699744-68699353 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 245 |
| Conread position: | 7-361 |
| Cow position: | chr3:46015877-46016219 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 142, 34 |
| Conread position: | 8-386 |
| Cow position: | chr3:36117893-36118274 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 166 |
| Conread position: | 10-386 |
| Cow position: | chr3:47081176-47080801 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 12-381 |
| Cow position: | chr3:4737738-4737368 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 13-257 |
| Cow position: | chr3:4027987-4028224 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 13-337 |
| Cow position: | chr3:48842407-48842729 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 225 |
| Conread position: | 15-354 |
| Cow position: | chr3:67528595-67528921 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 20-381 |
| Cow position: | chr3:29578876-29579231 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 224 |
| Conread position: | 26-340 |
| Cow position: | chr3:51137483-51137782 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 215, 44 |
| Conread position: | 27-376 |
| Cow position: | chr3:52654613-52654278 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 195, 89 |
| Conread position: | 27-381 |
| Cow position: | chr3:20870474-20870099 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 251 |
| Conread position: | 27-386 |
| Cow position: | chr3:27918685-27919047 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 177 |
| Conread position: | 30-342 |
| Cow position: | chr3:16888788-16888478 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 32-386 |
| Cow position: | chr3:7158461-7158114 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 206 |
| Conread position: | 34-305 |
| Cow position: | chr3:3054939-3055198 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 42-259 |
| Cow position: | chr3:54341989-54341775 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 44-343 |
| Cow position: | chr3:43415423-43415730 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 48-365 |
| Cow position: | chr3:46347747-46347448 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 65-386 |
| Cow position: | chr3:51242660-51242983 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 71-296 |
| Cow position: | chr3:60208311-60208086 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 87-328 |
| Cow position: | chr3:38493566-38493806 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 87-386 |
| Cow position: | chr3:47177966-47177661 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 95-377 |
| Cow position: | chr3:2710546-2710267 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 147 |
| Conread position: | 99-356 |
| Cow position: | chr3:80304845-80305104 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 174, 169 |
| Conread position: | 99-381 |
| Cow position: | chr3:52861812-52862083 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 99-386 |
| Cow position: | chr3:4286121-4286411 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 138 |
| Conread position: | 116-381 |
| Cow position: | chr3:83294546-83294279 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 125-381 |
| Cow position: | chr3:66367548-66367816 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 112 |
| Conread position: | 127-381 |
| Cow position: | chr3:48059078-48058820 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 115 |
| Conread position: | 129-280 |
| Cow position: | chr3:56322023-56322174 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 108 |
| Conread position: | 129-351 |
| Cow position: | chr3:19944610-19944824 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 80, 102 |
| Conread position: | 157-384 |
| Cow position: | chr3:64357406-64357181 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 166-381 |
| Cow position: | chr3:19890208-19889992 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 194-384 |
| Cow position: | chr3:24589584-24589398 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 169, 21 |
| Conread position: | 195-386 |
| Cow position: | chr3:19800759-19800565 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 219-386 |
| Cow position: | chr3:7169656-7169819 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 23 |
| Conread position: | 238-381 |
| Cow position: | chr3:42447566-42447713 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 240-386 |
| Cow position: | chr3:13967547-13967398 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 98 |
| Conread position: | 254-381 |
| Cow position: | chr3:4028365-4028492 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 634-847 |
| Cow position: | chr3:23289741-23289529 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 640-817 |
| Cow position: | chr3:68873153-68872978 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 641-847 |
| Cow position: | chr3:18812109-18812311 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 642-847 |
| Cow position: | chr3:64357188-64356989 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 644-793 |
| Cow position: | chr3:49136935-49136787 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 131, 71 |
| Conread position: | 644-838 |
| Cow position: | chr3:72630679-72630872 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 644-845 |
| Cow position: | chr3:75040557-75040357 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr3:7480625-7480423 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 644-847 |
| Cow position: | chr3:30315167-30315366 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 644-847 |
| Cow position: | chr3:49544603-49544404 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 644-847 |
| Cow position: | chr3:64016757-64016558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 644-847 |
| Cow position: | chr3:78026814-78026614 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 649-847 |
| Cow position: | chr3:47177663-47177467 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 650-847 |
| Cow position: | chr3:40824001-40824194 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 660-847 |
| Cow position: | chr3:48058735-48058549 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 661-847 |
| Cow position: | chr3:5953558-5953375 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.