Cow genome map
Conread name: | LyN1-MLN01E060086 |
Conread position: | 1-215 |
Cow position: | chr4:12587334-12587549 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 1-256 |
Cow position: | chr4:21256383-21256640 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 177 |
Conread position: | 1-271 |
Cow position: | chr4:33493860-33494133 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 1-335 |
Cow position: | chr4:41120339-41120689 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 17 |
Conread position: | 1-358 |
Cow position: | chr4:47254964-47254621 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 253 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 187, 72 |
Conread position: | 1-359 |
Cow position: | chr4:17926219-17925857 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 240 |
Conread position: | 1-365 |
Cow position: | chr4:43319611-43319244 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 238 |
Conread position: | 1-365 |
Cow position: | chr4:45049263-45048896 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 242 |
Conread position: | 1-366 |
Cow position: | chr4:11111386-11111023 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 47 |
Conread position: | 1-377 |
Cow position: | chr4:18516931-18517307 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 137 |
Conread position: | 1-381 |
Cow position: | chr4:355944-356322 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 136 |
Conread position: | 1-381 |
Cow position: | chr4:12241182-12240796 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 241 |
Conread position: | 1-381 |
Cow position: | chr4:26886825-26886442 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 17 |
Conread position: | 1-381 |
Cow position: | chr4:31669307-31669688 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 237 |
Conread position: | 1-381 |
Cow position: | chr4:36896403-36896785 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 237 |
Conread position: | 1-381 |
Cow position: | chr4:43881144-43881518 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 237 |
Conread position: | 1-386 |
Cow position: | chr4:6490329-6489945 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 159 |
Conread position: | 1-386 |
Cow position: | chr4:46664549-46664939 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 239 |
Conread position: | 1-388 |
Cow position: | chr4:48026432-48026822 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 243 |
Conread position: | 1-401 |
Cow position: | chr4:44725119-44725523 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 237 |
Conread position: | 2-364 |
Cow position: | chr4:6211886-6211514 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 254 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 33, 162 |
Conread position: | 2-381 |
Cow position: | chr4:11837604-11837234 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 265 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 20, 53 |
Conread position: | 2-381 |
Cow position: | chr4:25599465-25599083 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 59 |
Conread position: | 2-381 |
Cow position: | chr4:51043215-51042840 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 10 |
Conread position: | 2-386 |
Cow position: | chr4:60264122-60263745 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 28 |
Conread position: | 4-376 |
Cow position: | chr4:54158684-54159038 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 263 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 25, 76 |
Conread position: | 4-387 |
Cow position: | chr4:4176829-4177208 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 260 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 94, 75 |
Conread position: | 5-328 |
Cow position: | chr4:28831381-28831692 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 14 |
Conread position: | 5-338 |
Cow position: | chr4:44925479-44925149 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 226 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 20, 153 |
Conread position: | 5-350 |
Cow position: | chr4:9423403-9423065 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 222 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 103, 17 |
Conread position: | 5-377 |
Cow position: | chr4:16359921-16360287 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 233 |
Conread position: | 5-381 |
Cow position: | chr4:31565265-31564891 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 123 |
Conread position: | 6-114 |
Cow position: | chr4:158549-158658 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 6-179 |
Cow position: | chr4:27333468-27333642 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 6-183 |
Cow position: | chr4:65223500-65223322 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 6-293 |
Cow position: | chr4:19093459-19093746 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 7, 69 |
Conread position: | 6-324 |
Cow position: | chr4:9354742-9354424 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-325 |
Cow position: | chr4:6268598-6268274 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 237 |
Conread position: | 6-357 |
Cow position: | chr4:14821508-14821165 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 72 |
Conread position: | 6-386 |
Cow position: | chr4:100900-100516 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr4:1930590-1930211 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 84 |
Conread position: | 6-386 |
Cow position: | chr4:3125829-3126209 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-386 |
Cow position: | chr4:4416115-4416492 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 122 |
Conread position: | 6-386 |
Cow position: | chr4:5880199-5880583 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 222 |
Conread position: | 6-386 |
Cow position: | chr4:13548063-13548446 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 108 |
Conread position: | 6-386 |
Cow position: | chr4:16056635-16057017 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 76 |
Conread position: | 6-386 |
Cow position: | chr4:16326741-16326357 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr4:18190439-18190812 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 232 |
Conread position: | 6-386 |
Cow position: | chr4:18424491-18424108 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr4:32212201-32212585 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 237 |
Conread position: | 6-386 |
Cow position: | chr4:41954508-41954888 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 19 |
Conread position: | 6-386 |
Cow position: | chr4:41958163-41958543 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 19 |
Conread position: | 13-380 |
Cow position: | chr4:33072780-33072409 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 230 |
Conread position: | 14-343 |
Cow position: | chr4:64984396-64984717 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 220 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 93, 67 |
Conread position: | 21-365 |
Cow position: | chr4:27295463-27295111 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 85, 229 |
Conread position: | 22-381 |
Cow position: | chr4:13493365-13493731 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 219 |
Conread position: | 23-381 |
Cow position: | chr4:61694456-61694118 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 22 |
Conread position: | 35-229 |
Cow position: | chr4:12607601-12607407 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 154 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 174, 81 |
Conread position: | 41-381 |
Cow position: | chr4:57984056-57984400 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 197 |
Conread position: | 93-381 |
Cow position: | chr4:29531753-29531467 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 144 |
Conread position: | 99-381 |
Cow position: | chr4:62568561-62568845 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 81, 133 |
Conread position: | 106-386 |
Cow position: | chr4:529533-529817 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 132 |
Conread position: | 112-386 |
Cow position: | chr4:159296-159575 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 124 |
Conread position: | 117-386 |
Cow position: | chr4:27301300-27301051 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 249, 27 |
Conread position: | 128-381 |
Cow position: | chr4:41332869-41333125 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 159 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 60, 115 |
Conread position: | 166-386 |
Cow position: | chr4:27333903-27334129 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 175 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 40, 71 |
Conread position: | 197-386 |
Cow position: | chr4:603246-603432 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 152 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 128, 44 |
Conread position: | 210-381 |
Cow position: | chr4:58689847-58689680 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 226-381 |
Cow position: | chr4:12587593-12587750 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 94, 16 |
Conread position: | 240-386 |
Cow position: | chr4:17093596-17093448 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 69 |
Conread position: | 634-845 |
Cow position: | chr4:41333112-41333317 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 160 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 11, 82 |
Conread position: | 635-847 |
Cow position: | chr4:58689691-58689480 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 636-847 |
Cow position: | chr4:1049859-1049652 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 9, 78 |
Conread position: | 638-847 |
Cow position: | chr4:43319240-43319030 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 639-847 |
Cow position: | chr4:6206002-6206207 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 159 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 640-847 |
Cow position: | chr4:11110867-11110652 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 640-847 |
Cow position: | chr4:43881512-43881718 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 640-847 |
Cow position: | chr4:64853843-64853640 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 161 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 644-844 |
Cow position: | chr4:46664932-46665127 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 644-847 |
Cow position: | chr4:356320-356522 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 58, 66 |
Conread position: | 644-847 |
Cow position: | chr4:25599085-25598884 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 160 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 644-847 |
Cow position: | chr4:31564893-31564696 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 644-847 |
Cow position: | chr4:36896783-36896985 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 161 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 650-846 |
Cow position: | chr4:44726013-44726208 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 154 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 650-847 |
Cow position: | chr4:33072404-33072208 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 155 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 660-809 |
Cow position: | chr4:14820941-14820795 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 147, 57 |
Show alignments to all cow chromosomes.