Cow genome map


           Conread name:
           LyN1-MLN01E060086
        

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 177
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               187, 72
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 240
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 238
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 242
               

               Conread position:
               1-366
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 47
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 137
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 136
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 241
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 17
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 159
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 239
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 243
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 237
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 162
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               2-386
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               4-376
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               4-387
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               94, 75
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               5-338
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               5-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 233
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 123
               

               Conread position:
               6-114
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               6-179
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               6-183
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               6-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 237
               

               Conread position:
               6-357
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 72
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 84
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 122
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 222
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 108
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 76
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 232
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 237
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               13-380
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 230
               

               Conread position:
               14-343
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               21-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 229
               

               Conread position:
               22-381
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 219
               

               Conread position:
               23-381
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               35-229
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               174, 81
               

               Conread position:
               41-381
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 197
               

               Conread position:
               93-381
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 144
               

               Conread position:
               99-381
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 133
               

               Conread position:
               106-386
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 132
               

               Conread position:
               112-386
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 124
               

               Conread position:
               117-386
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               249, 27
               

               Conread position:
               128-381
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               166-386
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               197-386
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 44
               

               Conread position:
               210-381
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               226-381
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               240-386
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               634-845
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               635-847
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               636-847
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               638-847
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               639-847
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               640-847
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               644-844
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-847
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               650-846
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               650-847
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               660-809
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               147, 57
               
Show alignments to all cow chromosomes.