Cow genome map

Conread name: LyN1-MLN01E060086

Conread position: 1-143
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 181

Conread position: 1-331
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 32

Conread position: 1-333
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 207

Conread position: 1-352
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 240

Conread position: 1-357
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 1-377
Cow position:
Alignm length: 383
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 170

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 164

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 150

Conread position: 1-381
Cow position:
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 238

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 23

Conread position: 1-381
Cow position:
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 42

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 240

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-381
Cow position:
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 238

Conread position: 1-381
Cow position:
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 236

Conread position: 1-383
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 104, 127

Conread position: 1-386
Cow position:
Alignm length: 391
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 217

Conread position: 1-386
Cow position:
Alignm length: 395
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 78

Conread position: 2-323
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 186, 129

Conread position: 2-332
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 2-357
Cow position:
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 178

Conread position: 2-381
Cow position:
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 155

Conread position: 2-381
Cow position:
Alignm length: 388
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 2-381
Cow position:
Alignm length: 404
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 175

Conread position: 2-381
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 92, 22

Conread position: 2-381
Cow position:
Alignm length: 383
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 15

Conread position: 2-387
Cow position:
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 77

Conread position: 5-206
Cow position:
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 5-240
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 5-381
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 59

Conread position: 6-201
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 57

Conread position: 6-222
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-228
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 6-283
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 6-307
Cow position:
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 147

Conread position: 6-346
Cow position:
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 234

Conread position: 6-359
Cow position:
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 6-376
Cow position:
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-385
Cow position:
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position:
Alignm length: 386
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 6-386
Cow position:
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 231

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 141

Conread position: 6-386
Cow position:
Alignm length: 384
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 6-386
Cow position:
Alignm length: 388
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-386
Cow position:
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 6-387
Cow position:
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 6-387
Cow position:
Alignm length: 397
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 180

Conread position: 8-365
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 32

Conread position: 8-365
Cow position:
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 230

Conread position: 8-375
Cow position:
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 219

Conread position: 9-381
Cow position:
Alignm length: 379
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 162

Conread position: 10-381
Cow position:
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 227

Conread position: 12-377
Cow position:
Alignm length: 372
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 226

Conread position: 12-386
Cow position:
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 13-323
Cow position:
Alignm length: 320
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 125

Conread position: 13-385
Cow position:
Alignm length: 377
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 16

Conread position: 21-386
Cow position:
Alignm length: 372
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 217

Conread position: 22-386
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 89

Conread position: 23-335
Cow position:
Alignm length: 316
Alignm identity: 203
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 292, 52

Conread position: 28-381
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 113

Conread position: 35-386
Cow position:
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 84

Conread position: 36-260
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 43

Conread position: 39-367
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 5

Conread position: 44-227
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 44-386
Cow position:
Alignm length: 350
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 131

Conread position: 63-386
Cow position:
Alignm length: 331
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 176

Conread position: 64-386
Cow position:
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 174

Conread position: 88-381
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 43

Conread position: 90-384
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 98-271
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 75

Conread position: 111-381
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 126

Conread position: 111-386
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 111-386
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 131

Conread position: 116-386
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 116-386
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 126

Conread position: 127-386
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 110

Conread position: 129-265
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 108

Conread position: 131-386
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 106

Conread position: 148-386
Cow position:
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 95

Conread position: 151-312
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 24

Conread position: 152-381
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 91

Conread position: 157-356
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 85

Conread position: 157-386
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 85

Conread position: 161-381
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 37

Conread position: 166-381
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 71

Conread position: 178-386
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 64

Conread position: 196-381
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 21

Conread position: 197-386
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 45

Conread position: 200-386
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 41

Conread position: 208-386
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 111, 33

Conread position: 256-384
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 83

Conread position: 263-381
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 73

Conread position: 273-386
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 65

Conread position: 619-847
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 15

Conread position: 640-846
Cow position:
Alignm length: 207
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 640-847
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 74

Conread position: 644-825
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 644-830
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 644-846
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 644-847
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 70

Conread position: 644-847
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 135, 73

Conread position: 644-847
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 71

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 644-847
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 660-847
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 40

Conread position: 661-847
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.