Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 184-378 |
| Cow position: | chr11:35668274-35668471 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 191-449 |
| Cow position: | chr11:55821549-55821791 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 193-410 |
| Cow position: | chr11:14941444-14941654 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 211, 76 |
| Conread position: | 193-455 |
| Cow position: | chr11:47565772-47566032 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 194-345 |
| Cow position: | chr11:39864361-39864210 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 194-355 |
| Cow position: | chr11:45553918-45553765 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 195-398 |
| Cow position: | chr11:14045915-14046113 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 195-407 |
| Cow position: | chr11:29802430-29802632 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 196-381 |
| Cow position: | chr11:75255563-75255389 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 196-451 |
| Cow position: | chr11:21852133-21852393 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 100 |
| Conread position: | 196-451 |
| Cow position: | chr11:48650939-48650707 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 226, 31 |
| Conread position: | 196-451 |
| Cow position: | chr11:56821079-56821339 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 176, 73 |
| Conread position: | 196-456 |
| Cow position: | chr11:51729457-51729194 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 65, 203 |
| Conread position: | 196-456 |
| Cow position: | chr11:55762039-55761777 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 197-339 |
| Cow position: | chr11:54058153-54058013 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 197-451 |
| Cow position: | chr11:37372473-37372220 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 197-451 |
| Cow position: | chr11:43525959-43526216 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 197-451 |
| Cow position: | chr11:45890121-45889876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 198-368 |
| Cow position: | chr11:35882072-35881903 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 198-410 |
| Cow position: | chr11:63508572-63508366 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 205, 73 |
| Conread position: | 198-438 |
| Cow position: | chr11:67236556-67236325 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 223, 22 |
| Conread position: | 198-448 |
| Cow position: | chr11:62215031-62215277 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 198-451 |
| Cow position: | chr11:18572964-18572713 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 198-451 |
| Cow position: | chr11:54133926-54134160 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 198-451 |
| Cow position: | chr11:69402090-69402339 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 72 |
| Conread position: | 198-456 |
| Cow position: | chr11:16001087-16000834 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 117, 73 |
| Conread position: | 198-490 |
| Cow position: | chr11:30211066-30210778 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 199-351 |
| Cow position: | chr11:49218187-49218338 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 199-355 |
| Cow position: | chr11:372984-373139 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 199-356 |
| Cow position: | chr11:40269438-40269589 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 199-391 |
| Cow position: | chr11:19606472-19606288 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 199-406 |
| Cow position: | chr11:40275441-40275645 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-406 |
| Cow position: | chr11:40278933-40279137 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-410 |
| Cow position: | chr11:23047604-23047806 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-415 |
| Cow position: | chr11:19502128-19501914 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 213, 70 |
| Conread position: | 199-418 |
| Cow position: | chr11:38639279-38639055 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 199-420 |
| Cow position: | chr11:46705379-46705595 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 199-437 |
| Cow position: | chr11:81518020-81518249 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 220, 19 |
| Conread position: | 199-450 |
| Cow position: | chr11:17151831-17151586 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 220, 72 |
| Conread position: | 199-451 |
| Cow position: | chr11:11752356-11752606 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 221, 71 |
| Conread position: | 199-451 |
| Cow position: | chr11:12111296-12111542 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 73, 96 |
| Conread position: | 199-451 |
| Cow position: | chr11:18699050-18698789 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 199-451 |
| Cow position: | chr11:41272298-41272047 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 222, 72 |
| Conread position: | 199-451 |
| Cow position: | chr11:42083633-42083384 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 62, 95 |
| Conread position: | 199-451 |
| Cow position: | chr11:44815664-44815417 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 227, 72 |
| Conread position: | 199-451 |
| Cow position: | chr11:49153120-49152863 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 199-451 |
| Cow position: | chr11:53445930-53445688 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 220, 33 |
| Conread position: | 199-451 |
| Cow position: | chr11:54244833-54244590 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 220, 72 |
| Conread position: | 199-451 |
| Cow position: | chr11:63156764-63156997 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 220, 52 |
| Conread position: | 199-454 |
| Cow position: | chr11:84795592-84795842 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 219, 19 |
| Conread position: | 200-326 |
| Cow position: | chr11:76851678-76851802 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 200-345 |
| Cow position: | chr11:22009227-22009371 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 200-356 |
| Cow position: | chr11:5188285-5188134 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 200-371 |
| Cow position: | chr11:44609719-44609555 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-374 |
| Cow position: | chr11:48900680-48900858 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 95 |
| Conread position: | 200-379 |
| Cow position: | chr11:58112768-58112945 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-383 |
| Cow position: | chr11:60985123-60985299 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 200-407 |
| Cow position: | chr11:65958541-65958745 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 200-429 |
| Cow position: | chr11:52402622-52402396 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 208, 29 |
| Conread position: | 200-431 |
| Cow position: | chr11:75874593-75874826 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 198 |
| Conread position: | 200-437 |
| Cow position: | chr11:27722552-27722316 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 220, 68 |
| Conread position: | 200-438 |
| Cow position: | chr11:1596303-1596531 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 200-445 |
| Cow position: | chr11:62599361-62599130 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 215, 69 |
| Conread position: | 200-446 |
| Cow position: | chr11:21136973-21136729 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 205, 69 |
| Conread position: | 200-449 |
| Cow position: | chr11:65988380-65988144 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 219, 18 |
| Conread position: | 200-451 |
| Cow position: | chr11:24967598-24967366 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 200-451 |
| Cow position: | chr11:28395635-28395382 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 220, 73 |
| Conread position: | 200-451 |
| Cow position: | chr11:32438793-32439040 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 70 |
| Conread position: | 200-451 |
| Cow position: | chr11:38794691-38794458 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 200-451 |
| Cow position: | chr11:47125703-47125459 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 200-451 |
| Cow position: | chr11:47193673-47193431 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-451 |
| Cow position: | chr11:50937579-50937836 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 59, 183 |
| Conread position: | 200-451 |
| Cow position: | chr11:53452190-53452436 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 221, 60 |
| Conread position: | 200-451 |
| Cow position: | chr11:67871444-67871693 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 205, 70 |
| Conread position: | 200-456 |
| Cow position: | chr11:8828473-8828723 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 221, 71 |
| Conread position: | 200-456 |
| Cow position: | chr11:9368985-9368733 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 200-456 |
| Cow position: | chr11:38845108-38845356 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 219, 22 |
| Conread position: | 200-459 |
| Cow position: | chr11:6041595-6041849 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 188, 29 |
| Conread position: | 200-459 |
| Cow position: | chr11:9056116-9055862 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 219, 44 |
| Conread position: | 200-481 |
| Cow position: | chr11:26468306-26468027 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 201-356 |
| Cow position: | chr11:34136660-34136507 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 201-369 |
| Cow position: | chr11:6729826-6729659 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 201-415 |
| Cow position: | chr11:61427746-61427541 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 201-428 |
| Cow position: | chr11:11785491-11785265 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 201-442 |
| Cow position: | chr11:19259354-19259594 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 201-451 |
| Cow position: | chr11:1668824-1668588 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 201-451 |
| Cow position: | chr11:9874471-9874231 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 218, 73 |
| Conread position: | 201-451 |
| Cow position: | chr11:32072301-32072061 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 221, 68 |
| Conread position: | 201-451 |
| Cow position: | chr11:34945913-34946161 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 70 |
| Conread position: | 201-451 |
| Cow position: | chr11:51745501-51745267 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 221, 33 |
| Conread position: | 201-451 |
| Cow position: | chr11:62573850-62574094 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 201-451 |
| Cow position: | chr11:77683330-77683079 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 68 |
| Conread position: | 201-455 |
| Cow position: | chr11:14308793-14308544 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 215, 47 |
| Conread position: | 201-455 |
| Cow position: | chr11:52832568-52832809 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 220, 19 |
| Conread position: | 201-480 |
| Cow position: | chr11:84890549-84890838 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 202-422 |
| Cow position: | chr11:5648896-5648684 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 216, 68 |
| Conread position: | 202-448 |
| Cow position: | chr11:50953406-50953652 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 202, 68 |
| Conread position: | 202-451 |
| Cow position: | chr11:7001772-7002022 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 129, 69 |
| Conread position: | 203-445 |
| Cow position: | chr11:16232778-16233024 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 134, 68 |
| Conread position: | 203-451 |
| Cow position: | chr11:31507004-31506756 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 203-452 |
| Cow position: | chr11:27681657-27681409 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 68 |
| Conread position: | 206-447 |
| Cow position: | chr11:4059909-4060143 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 207-410 |
| Cow position: | chr11:31422883-31422682 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 208-450 |
| Cow position: | chr11:19586612-19586367 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 210-524 |
| Cow position: | chr11:696199-696502 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 209, 61 |
| Conread position: | 213-447 |
| Cow position: | chr11:59365928-59366163 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 213-456 |
| Cow position: | chr11:50951701-50951461 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 191, 57 |
| Conread position: | 217-451 |
| Cow position: | chr11:2484377-2484602 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 202, 10 |
| Conread position: | 224-454 |
| Cow position: | chr11:67174842-67174628 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 195, 49 |
| Conread position: | 225-449 |
| Cow position: | chr11:7684091-7683878 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 227-370 |
| Cow position: | chr11:77008173-77008033 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 227-451 |
| Cow position: | chr11:64905130-64904909 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 229-452 |
| Cow position: | chr11:25112387-25112609 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 190, 76 |
| Conread position: | 235-451 |
| Cow position: | chr11:20491691-20491483 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 150, 14 |
| Conread position: | 239-447 |
| Cow position: | chr11:60137810-60137609 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 181, 32 |
| Conread position: | 240-451 |
| Cow position: | chr11:12949830-12950034 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 179, 21 |
| Conread position: | 241-407 |
| Cow position: | chr11:76404417-76404256 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 241-428 |
| Cow position: | chr11:72082822-72082641 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 180, 30 |
| Conread position: | 241-451 |
| Cow position: | chr11:24243911-24243705 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 242-396 |
| Cow position: | chr11:8232333-8232484 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 243-451 |
| Cow position: | chr11:27765272-27765062 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 243-451 |
| Cow position: | chr11:35775454-35775250 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 176, 28 |
| Conread position: | 243-452 |
| Cow position: | chr11:32398750-32398547 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 252-451 |
| Cow position: | chr11:16540972-16540773 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 252-451 |
| Cow position: | chr11:46413680-46413488 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 255-456 |
| Cow position: | chr11:9083582-9083382 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 163, 68 |
| Conread position: | 256-451 |
| Cow position: | chr11:21473020-21473206 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 259-456 |
| Cow position: | chr11:70097382-70097191 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 260-414 |
| Cow position: | chr11:39250070-39249918 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 260-451 |
| Cow position: | chr11:36658722-36658909 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 260-454 |
| Cow position: | chr11:66188217-66188414 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 261-451 |
| Cow position: | chr11:65444749-65444934 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 262-456 |
| Cow position: | chr11:46024609-46024791 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 263-451 |
| Cow position: | chr11:11125758-11125574 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 263-451 |
| Cow position: | chr11:37160887-37160698 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 265-451 |
| Cow position: | chr11:67745415-67745234 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 265-456 |
| Cow position: | chr11:25331649-25331833 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 275-451 |
| Cow position: | chr11:52983761-52983588 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 286-451 |
| Cow position: | chr11:16261951-16262116 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 5 |
| Conread position: | 310-451 |
| Cow position: | chr11:42232657-42232517 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 348-455 |
| Cow position: | chr11:8846480-8846588 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.