Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 191-450 |
| Cow position: | chr14:45849361-45849108 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 194-451 |
| Cow position: | chr14:11615362-11615105 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 223, 82 |
| Conread position: | 196-407 |
| Cow position: | chr14:7648158-7647948 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 197-437 |
| Cow position: | chr14:10692398-10692167 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 208, 21 |
| Conread position: | 197-451 |
| Cow position: | chr14:37884537-37884300 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 198-378 |
| Cow position: | chr14:9065757-9065934 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 198-451 |
| Cow position: | chr14:7813703-7813456 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 221, 73 |
| Conread position: | 198-451 |
| Cow position: | chr14:47604431-47604184 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 221, 22 |
| Conread position: | 198-452 |
| Cow position: | chr14:2189499-2189748 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 73 |
| Conread position: | 198-456 |
| Cow position: | chr14:26108497-26108753 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 51 |
| Conread position: | 198-468 |
| Cow position: | chr14:12954530-12954251 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 220 |
| Conread position: | 199-380 |
| Cow position: | chr14:26153404-26153226 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 165, 72 |
| Conread position: | 199-389 |
| Cow position: | chr14:41531798-41531612 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-445 |
| Cow position: | chr14:8488061-8488293 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 189, 72 |
| Conread position: | 199-445 |
| Cow position: | chr14:25639907-25639669 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 199-451 |
| Cow position: | chr14:20865444-20865206 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 199-451 |
| Cow position: | chr14:39058441-39058691 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 199-452 |
| Cow position: | chr14:26493737-26493991 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 221, 56 |
| Conread position: | 199-455 |
| Cow position: | chr14:44861367-44861119 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 208, 72 |
| Conread position: | 199-458 |
| Cow position: | chr14:30179665-30179393 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 199-468 |
| Cow position: | chr14:21691411-21691144 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 71 |
| Conread position: | 200-371 |
| Cow position: | chr14:20795643-20795807 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 200-373 |
| Cow position: | chr14:26805186-26805014 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 200-378 |
| Cow position: | chr14:36081049-36080877 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-380 |
| Cow position: | chr14:44031900-44032079 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 200-398 |
| Cow position: | chr14:47519886-47519691 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 200-404 |
| Cow position: | chr14:19023031-19022831 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 200-420 |
| Cow position: | chr14:28605098-28605315 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 200-428 |
| Cow position: | chr14:6441773-6442001 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 220, 70 |
| Conread position: | 200-445 |
| Cow position: | chr14:33553061-33553293 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 200-446 |
| Cow position: | chr14:38355055-38355294 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 219, 51 |
| Conread position: | 200-450 |
| Cow position: | chr14:15997905-15997650 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 206 |
| Conread position: | 200-450 |
| Cow position: | chr14:35700294-35700538 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 219, 69 |
| Conread position: | 200-451 |
| Cow position: | chr14:21017982-21018225 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 219, 7 |
| Conread position: | 200-451 |
| Cow position: | chr14:25386020-25385773 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 200-451 |
| Cow position: | chr14:37679137-37678889 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 200-456 |
| Cow position: | chr14:37333566-37333808 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 201-445 |
| Cow position: | chr14:14182199-14182455 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 201-450 |
| Cow position: | chr14:13809802-13810049 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 174 |
| Conread position: | 201-451 |
| Cow position: | chr14:23107186-23107440 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 201-455 |
| Cow position: | chr14:18979326-18979083 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 200, 48 |
| Conread position: | 203-451 |
| Cow position: | chr14:6789254-6789497 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 202, 65 |
| Conread position: | 204-387 |
| Cow position: | chr14:20701947-20701769 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 204-449 |
| Cow position: | chr14:43031666-43031910 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 215, 66 |
| Conread position: | 205-446 |
| Cow position: | chr14:12559606-12559373 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 185, 46 |
| Conread position: | 210-350 |
| Cow position: | chr14:20284029-20284168 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 59 |
| Conread position: | 210-451 |
| Cow position: | chr14:22459980-22459755 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 215-446 |
| Cow position: | chr14:20045432-20045660 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 224-420 |
| Cow position: | chr14:15990114-15990298 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 224-451 |
| Cow position: | chr14:47027482-47027256 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 183, 45 |
| Conread position: | 225-410 |
| Cow position: | chr14:47138897-47138717 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 178, 46 |
| Conread position: | 239-448 |
| Cow position: | chr14:26448664-26448859 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 180, 29 |
| Conread position: | 240-439 |
| Cow position: | chr14:21084246-21084444 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 150, 31 |
| Conread position: | 241-451 |
| Cow position: | chr14:42419365-42419161 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 243-443 |
| Cow position: | chr14:44595215-44595020 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 243-451 |
| Cow position: | chr14:47551366-47551164 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 157, 27 |
| Conread position: | 248-446 |
| Cow position: | chr14:20435305-20435503 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 249-482 |
| Cow position: | chr14:20429495-20429727 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 22 |
| Conread position: | 250-445 |
| Cow position: | chr14:9837978-9837779 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 255-451 |
| Cow position: | chr14:7582528-7582339 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 167, 13 |
| Conread position: | 255-451 |
| Cow position: | chr14:23008102-23008290 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 255-451 |
| Cow position: | chr14:31784890-31785080 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 166, 7 |
| Conread position: | 260-451 |
| Cow position: | chr14:19863511-19863320 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 136 |
| Conread position: | 269-451 |
| Cow position: | chr14:25378562-25378382 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 271-448 |
| Cow position: | chr14:803621-803797 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 271-455 |
| Cow position: | chr14:19618815-19618634 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 280-437 |
| Cow position: | chr14:12484619-12484462 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 349-451 |
| Cow position: | chr14:21273830-21273933 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.