Cow genome map

Conread name: LyN1-MLN01E070058

Conread position: 190-456
Cow position: chr15:51307786-51307515 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 28

Conread position: 193-467
Cow position: chr15:31042769-31043046 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 100

Conread position: 195-448
Cow position: chr15:27863419-27863168 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 227, 76

Conread position: 196-419
Cow position: chr15:25688874-25689098 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 186, 39

Conread position: 196-438
Cow position: chr15:42195353-42195118 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 226, 33

Conread position: 196-443
Cow position: chr15:24864355-24864117 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 223, 36

Conread position: 196-451
Cow position: chr15:15214925-15215179 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 225, 75

Conread position: 197-379
Cow position: chr15:19323232-19323408 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 149, 74

Conread position: 197-406
Cow position: chr15:20777927-20778133 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 197-419
Cow position: chr15:26934040-26933821 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 197-451
Cow position: chr15:4508060-4508308 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 90, 51

Conread position: 197-451
Cow position: chr15:27247415-27247661 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 222, 123

Conread position: 197-451
Cow position: chr15:43776262-43776509 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 198-388
Cow position: chr15:14020389-14020584 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 98

Conread position: 198-415
Cow position: chr15:23109373-23109159 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 198-445
Cow position: chr15:8230652-8230410 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 191, 31

Conread position: 198-449
Cow position: chr15:37918556-37918799 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 220, 76

Conread position: 198-451
Cow position: chr15:24411331-24411574 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 72, 0

Conread position: 198-451
Cow position: chr15:39894508-39894747 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 220, 32

Conread position: 198-456
Cow position: chr15:22886468-22886714 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 220, 73

Conread position: 199-345
Cow position: chr15:2117796-2117939 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 199-417
Cow position: chr15:30958299-30958092 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 93, 21

Conread position: 199-418
Cow position: chr15:23992761-23992973 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 72

Conread position: 199-420
Cow position: chr15:34255807-34255599 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 199-438
Cow position: chr15:8021967-8022198 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 221, 33

Conread position: 199-447
Cow position: chr15:43611995-43612233 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 199-451
Cow position: chr15:12036727-12036971 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 19

Conread position: 199-451
Cow position: chr15:14758338-14758093 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 71

Conread position: 199-451
Cow position: chr15:34037275-34037036 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 30

Conread position: 199-454
Cow position: chr15:450139-449896 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 199-455
Cow position: chr15:37931842-37931598 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 19

Conread position: 200-369
Cow position: chr15:39916604-39916769 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 200-438
Cow position: chr15:19725797-19725575 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 184, 69

Conread position: 200-448
Cow position: chr15:38827421-38827168 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 217

Conread position: 200-451
Cow position: chr15:12163607-12163359 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 221, 71

Conread position: 200-451
Cow position: chr15:12170156-12170406 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 218, 69

Conread position: 200-451
Cow position: chr15:20482934-20482686 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 7

Conread position: 200-451
Cow position: chr15:21836604-21836841 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 219, 11

Conread position: 200-451
Cow position: chr15:24977261-24977018 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 222, 60

Conread position: 200-455
Cow position: chr15:24284897-24285144 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 200, 50

Conread position: 200-456
Cow position: chr15:44252278-44252528 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 219, 69

Conread position: 200-488
Cow position: chr15:33624865-33625151 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 78

Conread position: 201-389
Cow position: chr15:10569192-10569010 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 201-426
Cow position: chr15:20370811-20370593 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 201-441
Cow position: chr15:50177022-50177262 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 225, 70

Conread position: 201-449
Cow position: chr15:43130237-43130473 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 219, 62

Conread position: 201-451
Cow position: chr15:9971065-9970816 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 84, 68

Conread position: 201-451
Cow position: chr15:26573293-26573537 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 69

Conread position: 201-451
Cow position: chr15:28236971-28236734 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 52

Conread position: 202-424
Cow position: chr15:17788025-17788241 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 213, 60

Conread position: 202-451
Cow position: chr15:6749931-6749689 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 217, 67

Conread position: 202-455
Cow position: chr15:35967569-35967326 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 203-391
Cow position: chr15:1017833-1017645 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 91

Conread position: 204-454
Cow position: chr15:3571700-3571944 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 215, 16

Conread position: 204-467
Cow position: chr15:47821295-47821552 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 116, 67

Conread position: 208-451
Cow position: chr15:31617086-31616844 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 211, 64

Conread position: 209-407
Cow position: chr15:10303143-10303339 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 215-429
Cow position: chr15:9494363-9494156 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 203, 5

Conread position: 222-445
Cow position: chr15:48486571-48486789 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 200, 48

Conread position: 222-452
Cow position: chr15:17213393-17213611 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 224-451
Cow position: chr15:7962018-7962240 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 223, 46

Conread position: 224-451
Cow position: chr15:31545412-31545193 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 224-455
Cow position: chr15:53045941-53045714 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 63, 47

Conread position: 225-448
Cow position: chr15:6491655-6491434 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 194, 46

Conread position: 225-450
Cow position: chr15:19280155-19279930 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 46

Conread position: 227-450
Cow position: chr15:11957477-11957699 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 5, 46

Conread position: 232-451
Cow position: chr15:9000903-9001112 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 189, 27

Conread position: 239-371
Cow position: chr15:31502935-31502804 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 239-447
Cow position: chr15:40498342-40498135 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 182, 31

Conread position: 239-451
Cow position: chr15:26421647-26421440 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 180, 80

Conread position: 241-387
Cow position: chr15:4216185-4216049 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 242-451
Cow position: chr15:38322789-38322999 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 175, 29

Conread position: 248-449
Cow position: chr15:40117488-40117289 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 157, 22

Conread position: 250-387
Cow position: chr15:17911104-17911240 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 252-451
Cow position: chr15:36839209-36839014 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 139, 19

Conread position: 253-432
Cow position: chr15:26673616-26673443 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 18

Conread position: 256-451
Cow position: chr15:1830531-1830720 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 60

Conread position: 258-445
Cow position: chr15:30934573-30934398 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 12

Conread position: 259-420
Cow position: chr15:46005677-46005523 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 261-447
Cow position: chr15:43626441-43626623 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 30

Conread position: 261-451
Cow position: chr15:14176528-14176340 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 31

Conread position: 261-451
Cow position: chr15:35441107-35440916 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 81

Conread position: 262-456
Cow position: chr15:2668879-2669070 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 41

Conread position: 263-447
Cow position: chr15:10088294-10088473 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 11

Conread position: 264-451
Cow position: chr15:37644965-37645147 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 22

Conread position: 264-455
Cow position: chr15:23957689-23957866 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 155, 7

Conread position: 269-451
Cow position: chr15:43248797-43248612 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 270-449
Cow position: chr15:1857705-1857884 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 21

Conread position: 276-451
Cow position: chr15:16585499-16585668 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 146, 45

Conread position: 286-451
Cow position: chr15:13387075-13387239 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 7

Conread position: 294-447
Cow position: chr15:27732417-27732569 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 23

Conread position: 302-447
Cow position: chr15:39417935-39418078 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 311-451
Cow position: chr15:9928381-9928519 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 89

Conread position: 321-451
Cow position: chr15:10815156-10815029 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 45

Show alignments to all cow chromosomes.