Cow genome map

Conread name: LyN1-MLN01E070058

Conread position: 193-454
Cow position: chr18:51643200-51643474 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 110

Conread position: 195-446
Cow position: chr18:5756127-5755883 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 225, 76

Conread position: 196-335
Cow position: chr18:14520179-14520046 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 196-397
Cow position: chr18:48458817-48458623 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 196-445
Cow position: chr18:6158056-6157817 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 220, 24

Conread position: 196-451
Cow position: chr18:32909189-32908945 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 180, 13

Conread position: 196-451
Cow position: chr18:40893421-40893172 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 196-454
Cow position: chr18:30586070-30586329 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 96

Conread position: 197-452
Cow position: chr18:51486321-51486568 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 223, 35

Conread position: 197-456
Cow position: chr18:16841905-16842171 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 119, 73

Conread position: 198-451
Cow position: chr18:45961127-45961372 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 198-455
Cow position: chr18:51298625-51298372 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 214, 71

Conread position: 199-306
Cow position: chr18:4890897-4890791 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 199-375
Cow position: chr18:48036962-48036789 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 199-390
Cow position: chr18:6075245-6075440 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 91

Conread position: 199-398
Cow position: chr18:43554937-43555127 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 21

Conread position: 199-404
Cow position: chr18:26373065-26372862 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 199-406
Cow position: chr18:35767313-35767114 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 199-420
Cow position: chr18:43712191-43711975 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 150, 72

Conread position: 199-431
Cow position: chr18:46873724-46873946 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 218, 22

Conread position: 199-438
Cow position: chr18:51271600-51271845 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 100, 71

Conread position: 199-443
Cow position: chr18:38126305-38126546 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 63

Conread position: 199-446
Cow position: chr18:55696883-55697120 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 220, 35

Conread position: 199-449
Cow position: chr18:10101630-10101389 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 221, 19

Conread position: 199-451
Cow position: chr18:15831458-15831696 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 221, 21

Conread position: 199-451
Cow position: chr18:29796285-29796528 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 21

Conread position: 199-451
Cow position: chr18:34324805-34325056 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 77

Conread position: 199-456
Cow position: chr18:23714726-23714995 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 199-468
Cow position: chr18:26334661-26334933 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 72

Conread position: 200-349
Cow position: chr18:51241169-51241022 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 200-403
Cow position: chr18:4578344-4578543 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 45

Conread position: 200-404
Cow position: chr18:44493342-44493541 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 196, 69

Conread position: 200-406
Cow position: chr18:2777602-2777814 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 93

Conread position: 200-411
Cow position: chr18:33842941-33843151 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 171, 72

Conread position: 200-423
Cow position: chr18:50700828-50700610 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 200-437
Cow position: chr18:2438623-2438855 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 220, 20

Conread position: 200-440
Cow position: chr18:1190578-1190813 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 209, 71

Conread position: 200-441
Cow position: chr18:47525554-47525308 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 25

Conread position: 200-449
Cow position: chr18:25970503-25970736 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 222, 29

Conread position: 200-451
Cow position: chr18:19849609-19849859 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 163

Conread position: 200-452
Cow position: chr18:40202667-40202912 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 133, 69

Conread position: 200-457
Cow position: chr18:16448682-16448446 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 218, 20

Conread position: 200-459
Cow position: chr18:20126964-20127218 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 21

Conread position: 201-449
Cow position: chr18:51587405-51587645 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 219, 64

Conread position: 201-451
Cow position: chr18:248672-248917 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 201-451
Cow position: chr18:19193211-19193469 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 219

Conread position: 201-454
Cow position: chr18:2146431-2146694 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 202-451
Cow position: chr18:33300045-33299798 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 23

Conread position: 205-451
Cow position: chr18:37331390-37331630 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 217, 66

Conread position: 210-454
Cow position: chr18:42061209-42060969 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 209, 61

Conread position: 212-432
Cow position: chr18:43113817-43114029 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 206, 59

Conread position: 213-389
Cow position: chr18:26842967-26843142 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 58

Conread position: 213-456
Cow position: chr18:22143382-22143632 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 203

Conread position: 215-451
Cow position: chr18:21706055-21706282 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 204, 56

Conread position: 224-419
Cow position: chr18:44400566-44400377 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 224-445
Cow position: chr18:381054-380827 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 68

Conread position: 224-449
Cow position: chr18:22411492-22411716 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 179, 44

Conread position: 224-450
Cow position: chr18:24855724-24855948 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 194, 47

Conread position: 224-451
Cow position: chr18:16726768-16726545 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 46

Conread position: 225-424
Cow position: chr18:16298224-16298026 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 157, 45

Conread position: 227-447
Cow position: chr18:15689403-15689185 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 43

Conread position: 230-439
Cow position: chr18:56302008-56301798 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 50

Conread position: 232-451
Cow position: chr18:38344916-38344702 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 26

Conread position: 237-450
Cow position: chr18:20422872-20423077 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 239-410
Cow position: chr18:33275394-33275232 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 32

Conread position: 239-449
Cow position: chr18:23425023-23424818 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 145, 31

Conread position: 239-451
Cow position: chr18:32773983-32773773 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 179, 31

Conread position: 242-445
Cow position: chr18:16134212-16134416 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 179, 16

Conread position: 243-451
Cow position: chr18:25002789-25002983 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 244-440
Cow position: chr18:716469-716284 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 244-451
Cow position: chr18:1495403-1495201 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 249-454
Cow position: chr18:46320882-46321085 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 76

Conread position: 251-451
Cow position: chr18:35360060-35359867 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 171, 19

Conread position: 258-407
Cow position: chr18:21575072-21574924 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 264-451
Cow position: chr18:35797699-35797521 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 154, 7

Conread position: 271-441
Cow position: chr18:5078700-5078869 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 271-450
Cow position: chr18:213463-213642 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 148, 46

Conread position: 271-451
Cow position: chr18:11377438-11377261 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 14

Conread position: 271-452
Cow position: chr18:21681899-21682086 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 148, 46

Conread position: 279-451
Cow position: chr18:21176253-21176084 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 68

Conread position: 286-451
Cow position: chr18:38793828-38793988 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 289-456
Cow position: chr18:51500019-51500182 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 21

Conread position: 291-450
Cow position: chr18:55639305-55639455 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 294-469
Cow position: chr18:51002488-51002653 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.