Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 183-451 |
| Cow position: | chr19:1712958-1713224 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 185-345 |
| Cow position: | chr19:22014030-22013868 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 91, 85 |
| Conread position: | 186-445 |
| Cow position: | chr19:7030097-7029840 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 235, 65 |
| Conread position: | 186-451 |
| Cow position: | chr19:21284901-21285156 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 192-371 |
| Cow position: | chr19:38025867-38025689 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 194-441 |
| Cow position: | chr19:20291921-20292165 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 211, 68 |
| Conread position: | 195-451 |
| Cow position: | chr19:15937001-15936755 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 196-334 |
| Cow position: | chr19:5678924-5678787 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 196-445 |
| Cow position: | chr19:24721845-24721601 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 164, 76 |
| Conread position: | 196-451 |
| Cow position: | chr19:1153376-1153131 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 73 |
| Conread position: | 196-451 |
| Cow position: | chr19:9092642-9092881 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 196-451 |
| Cow position: | chr19:35540471-35540215 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 197-334 |
| Cow position: | chr19:5678713-5678577 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 197-447 |
| Cow position: | chr19:36245323-36245568 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 75, 149 |
| Conread position: | 197-454 |
| Cow position: | chr19:27346495-27346735 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 225, 16 |
| Conread position: | 197-456 |
| Cow position: | chr19:31984481-31984738 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 152, 21 |
| Conread position: | 198-445 |
| Cow position: | chr19:4824814-4825052 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 185, 72 |
| Conread position: | 198-449 |
| Cow position: | chr19:905134-904898 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 198-449 |
| Cow position: | chr19:31614276-31614033 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 198-451 |
| Cow position: | chr19:28842192-28842452 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 200, 73 |
| Conread position: | 198-455 |
| Cow position: | chr19:750376-750124 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 204 |
| Conread position: | 198-455 |
| Cow position: | chr19:32214965-32214713 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 198-456 |
| Cow position: | chr19:39250424-39250181 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 226, 22 |
| Conread position: | 199-326 |
| Cow position: | chr19:30652925-30653051 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 199-342 |
| Cow position: | chr19:36380389-36380250 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 199-354 |
| Cow position: | chr19:54817367-54817521 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 199-378 |
| Cow position: | chr19:47783596-47783776 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 129, 69 |
| Conread position: | 199-387 |
| Cow position: | chr19:22932382-22932568 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 199-391 |
| Cow position: | chr19:26003447-26003639 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 199-419 |
| Cow position: | chr19:30935603-30935823 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 199-451 |
| Cow position: | chr19:36461361-36461613 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 199-451 |
| Cow position: | chr19:42695174-42694910 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 199-451 |
| Cow position: | chr19:56063257-56063515 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 199-455 |
| Cow position: | chr19:25271252-25271501 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 222, 61 |
| Conread position: | 199-455 |
| Cow position: | chr19:33686250-33686002 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 204, 70 |
| Conread position: | 200-354 |
| Cow position: | chr19:50786375-50786523 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 200-395 |
| Cow position: | chr19:2280481-2280667 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 200-410 |
| Cow position: | chr19:5648506-5648709 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 200-445 |
| Cow position: | chr19:12040784-12040547 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 218, 70 |
| Conread position: | 200-449 |
| Cow position: | chr19:952854-952613 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 218, 61 |
| Conread position: | 200-449 |
| Cow position: | chr19:31126963-31126714 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 219, 71 |
| Conread position: | 200-450 |
| Cow position: | chr19:36976746-36976994 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 222, 71 |
| Conread position: | 200-451 |
| Cow position: | chr19:9387800-9387554 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 70 |
| Conread position: | 200-451 |
| Cow position: | chr19:11759063-11759330 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 161, 70 |
| Conread position: | 200-451 |
| Cow position: | chr19:38907196-38907439 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 200-451 |
| Cow position: | chr19:40026768-40027014 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 200-455 |
| Cow position: | chr19:10970924-10971181 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 219 |
| Conread position: | 200-455 |
| Cow position: | chr19:40450186-40449930 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 201-372 |
| Cow position: | chr19:39222946-39223107 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 201-437 |
| Cow position: | chr19:38871233-38870997 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 179, 69 |
| Conread position: | 201-443 |
| Cow position: | chr19:17020444-17020205 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 201-445 |
| Cow position: | chr19:31536291-31536050 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 222, 12 |
| Conread position: | 201-451 |
| Cow position: | chr19:35345093-35344843 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 70 |
| Conread position: | 202-451 |
| Cow position: | chr19:48479138-48478897 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 208-454 |
| Cow position: | chr19:55236643-55236404 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 213, 63 |
| Conread position: | 209-443 |
| Cow position: | chr19:24689434-24689204 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 206, 25 |
| Conread position: | 213-371 |
| Cow position: | chr19:5986388-5986231 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 215-456 |
| Cow position: | chr19:19246927-19246687 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 222-447 |
| Cow position: | chr19:31827233-31827021 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 198, 46 |
| Conread position: | 224-410 |
| Cow position: | chr19:50658280-50658098 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 225-456 |
| Cow position: | chr19:7838908-7839128 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 197, 16 |
| Conread position: | 230-451 |
| Cow position: | chr19:11876565-11876786 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 179, 41 |
| Conread position: | 232-457 |
| Cow position: | chr19:6735092-6735317 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 239-451 |
| Cow position: | chr19:3084083-3084290 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 239-456 |
| Cow position: | chr19:35064064-35064277 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 241-451 |
| Cow position: | chr19:53738458-53738254 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 154, 27 |
| Conread position: | 241-454 |
| Cow position: | chr19:54225185-54225392 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 242-364 |
| Cow position: | chr19:46306214-46306334 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 243-451 |
| Cow position: | chr19:2821705-2821500 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 179, 28 |
| Conread position: | 247-451 |
| Cow position: | chr19:11191502-11191698 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 251-424 |
| Cow position: | chr19:3080577-3080405 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 168, 19 |
| Conread position: | 252-455 |
| Cow position: | chr19:51800462-51800652 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 253-424 |
| Cow position: | chr19:9100260-9100089 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 255-451 |
| Cow position: | chr19:7884691-7884497 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 255-451 |
| Cow position: | chr19:19662155-19661964 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 260-451 |
| Cow position: | chr19:39254337-39254533 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 260-456 |
| Cow position: | chr19:7404269-7404465 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 260-456 |
| Cow position: | chr19:15887212-15887411 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 262-449 |
| Cow position: | chr19:25711223-25711397 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 274-447 |
| Cow position: | chr19:10207702-10207531 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 147, 36 |
| Conread position: | 279-451 |
| Cow position: | chr19:31595389-31595218 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 290-448 |
| Cow position: | chr19:47110118-47109960 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 131, 119 |
| Conread position: | 292-451 |
| Cow position: | chr19:44490169-44490014 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 296-450 |
| Cow position: | chr19:42273779-42273927 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
Show alignments to all cow chromosomes.