Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 183-428 |
| Cow position: | chr20:16979986-16979741 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 189-438 |
| Cow position: | chr20:38858205-38858434 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 190-406 |
| Cow position: | chr20:35924558-35924765 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 194-364 |
| Cow position: | chr20:13617455-13617283 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 196-449 |
| Cow position: | chr20:10759251-10759501 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 196-456 |
| Cow position: | chr20:1576320-1576060 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 197-409 |
| Cow position: | chr20:17363436-17363642 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 197-451 |
| Cow position: | chr20:220831-220594 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 197-451 |
| Cow position: | chr20:24868797-24869062 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 198-451 |
| Cow position: | chr20:26749993-26750234 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 198-451 |
| Cow position: | chr20:33532530-33532278 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 199-407 |
| Cow position: | chr20:7386771-7386574 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-410 |
| Cow position: | chr20:4157636-4157434 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 199-416 |
| Cow position: | chr20:13608850-13609058 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 199-417 |
| Cow position: | chr20:4334299-4334527 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 199-418 |
| Cow position: | chr20:4933850-4934064 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 199-438 |
| Cow position: | chr20:9706698-9706931 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 218, 71 |
| Conread position: | 199-448 |
| Cow position: | chr20:8262134-8261884 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 189, 33 |
| Conread position: | 199-451 |
| Cow position: | chr20:7101006-7100749 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 199-451 |
| Cow position: | chr20:10837995-10838243 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 215, 54 |
| Conread position: | 199-451 |
| Cow position: | chr20:30855539-30855781 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 199-451 |
| Cow position: | chr20:34108328-34108084 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 199-452 |
| Cow position: | chr20:35842908-35843156 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 220, 33 |
| Conread position: | 199-455 |
| Cow position: | chr20:24643929-24644178 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 200-345 |
| Cow position: | chr20:37136306-37136162 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-391 |
| Cow position: | chr20:311541-311356 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 91 |
| Conread position: | 200-391 |
| Cow position: | chr20:25146997-25146813 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 200-410 |
| Cow position: | chr20:41109878-41110084 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-423 |
| Cow position: | chr20:14513247-14513019 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 158, 29 |
| Conread position: | 200-437 |
| Cow position: | chr20:24234363-24234142 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 219, 14 |
| Conread position: | 200-445 |
| Cow position: | chr20:17670398-17670160 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 17 |
| Conread position: | 200-447 |
| Cow position: | chr20:5763075-5763320 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 216, 41 |
| Conread position: | 200-451 |
| Cow position: | chr20:19266366-19266127 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 220, 70 |
| Conread position: | 200-451 |
| Cow position: | chr20:20359564-20359812 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 200-454 |
| Cow position: | chr20:13465725-13465479 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 222, 68 |
| Conread position: | 201-451 |
| Cow position: | chr20:14679835-14679593 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 218, 67 |
| Conread position: | 201-451 |
| Cow position: | chr20:40511535-40511786 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 201-454 |
| Cow position: | chr20:6903531-6903284 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 192, 39 |
| Conread position: | 202-418 |
| Cow position: | chr20:23163688-23163896 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 202-451 |
| Cow position: | chr20:23235248-23235008 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 218, 69 |
| Conread position: | 202-454 |
| Cow position: | chr20:25686130-25686381 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 219, 68 |
| Conread position: | 204-386 |
| Cow position: | chr20:2430754-2430579 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 204-452 |
| Cow position: | chr20:17397049-17397287 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 205-437 |
| Cow position: | chr20:18530649-18530419 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 217, 37 |
| Conread position: | 206-407 |
| Cow position: | chr20:15241550-15241750 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 207-454 |
| Cow position: | chr20:4204498-4204261 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 208-451 |
| Cow position: | chr20:31081251-31081013 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 83 |
| Conread position: | 210-451 |
| Cow position: | chr20:1205728-1205960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 206, 44 |
| Conread position: | 212-445 |
| Cow position: | chr20:14540553-14540320 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 214-448 |
| Cow position: | chr20:39656448-39656225 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 207, 57 |
| Conread position: | 224-449 |
| Cow position: | chr20:15073636-15073861 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 224-455 |
| Cow position: | chr20:24850002-24849776 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 151, 44 |
| Conread position: | 227-391 |
| Cow position: | chr20:21236845-21236687 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 227-451 |
| Cow position: | chr20:6424165-6423944 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 122 |
| Conread position: | 240-392 |
| Cow position: | chr20:14471392-14471542 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 240-428 |
| Cow position: | chr20:39220537-39220723 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 182, 30 |
| Conread position: | 242-451 |
| Cow position: | chr20:42255036-42254832 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 246-449 |
| Cow position: | chr20:32861827-32862024 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 173, 24 |
| Conread position: | 246-456 |
| Cow position: | chr20:25274119-25274322 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 174, 25 |
| Conread position: | 247-451 |
| Cow position: | chr20:24834262-24834066 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 255-451 |
| Cow position: | chr20:29845216-29845022 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 6 |
| Conread position: | 257-384 |
| Cow position: | chr20:37450712-37450587 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 260-454 |
| Cow position: | chr20:9266947-9267138 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 261-451 |
| Cow position: | chr20:29805498-29805689 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 262-449 |
| Cow position: | chr20:26077241-26077055 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 262-456 |
| Cow position: | chr20:19339723-19339905 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 263-452 |
| Cow position: | chr20:10772363-10772175 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 271-455 |
| Cow position: | chr20:6096345-6096525 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 271-455 |
| Cow position: | chr20:12126154-12126336 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 283-451 |
| Cow position: | chr20:20471921-20471754 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 27 |
| Conread position: | 284-450 |
| Cow position: | chr20:5576912-5576746 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 295-441 |
| Cow position: | chr20:12430673-12430817 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 31 |
Show alignments to all cow chromosomes.