Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 172-447 |
| Cow position: | chr23:283170-283461 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 173-424 |
| Cow position: | chr23:13360033-13359785 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 98 |
| Conread position: | 180-451 |
| Cow position: | chr23:22396237-22396517 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 181-451 |
| Cow position: | chr23:6147836-6148113 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 186-452 |
| Cow position: | chr23:41310849-41311105 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 236, 82 |
| Conread position: | 192-417 |
| Cow position: | chr23:23904140-23904365 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 198, 68 |
| Conread position: | 192-451 |
| Cow position: | chr23:11750947-11751199 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 193-445 |
| Cow position: | chr23:38732436-38732185 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 194-455 |
| Cow position: | chr23:30308093-30307838 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 196-451 |
| Cow position: | chr23:19774950-19774705 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 196-451 |
| Cow position: | chr23:20996639-20996396 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 196-455 |
| Cow position: | chr23:791853-792104 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 218, 45 |
| Conread position: | 197-352 |
| Cow position: | chr23:24411188-24411034 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 74 |
| Conread position: | 197-407 |
| Cow position: | chr23:28721056-28721259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 205, 72 |
| Conread position: | 197-451 |
| Cow position: | chr23:21660137-21659875 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 173 |
| Conread position: | 197-451 |
| Cow position: | chr23:22660407-22660649 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 223, 74 |
| Conread position: | 198-391 |
| Cow position: | chr23:22272296-22272489 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 155, 73 |
| Conread position: | 198-437 |
| Cow position: | chr23:5389880-5389644 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 217, 72 |
| Conread position: | 198-451 |
| Cow position: | chr23:17000878-17000639 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 209, 20 |
| Conread position: | 198-456 |
| Cow position: | chr23:21275838-21276096 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 154, 48 |
| Conread position: | 199-339 |
| Cow position: | chr23:30735970-30736105 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 199-371 |
| Cow position: | chr23:30256046-30255871 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 199-432 |
| Cow position: | chr23:36082765-36082531 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 163, 75 |
| Conread position: | 199-435 |
| Cow position: | chr23:35155554-35155321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 71 |
| Conread position: | 199-447 |
| Cow position: | chr23:39753300-39753052 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 199-451 |
| Cow position: | chr23:20585521-20585767 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 72 |
| Conread position: | 199-451 |
| Cow position: | chr23:23191984-23192219 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 223, 19 |
| Conread position: | 199-451 |
| Cow position: | chr23:26217735-26217494 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 209, 21 |
| Conread position: | 199-451 |
| Cow position: | chr23:40891543-40891291 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 72 |
| Conread position: | 199-456 |
| Cow position: | chr23:18326984-18326733 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 220, 72 |
| Conread position: | 199-456 |
| Cow position: | chr23:24704482-24704208 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 200-355 |
| Cow position: | chr23:19981505-19981659 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 200-356 |
| Cow position: | chr23:33927987-33927832 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 200-398 |
| Cow position: | chr23:38941800-38941605 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 200-418 |
| Cow position: | chr23:26861611-26861405 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 200-447 |
| Cow position: | chr23:14840338-14840578 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 200, 15 |
| Conread position: | 200-449 |
| Cow position: | chr23:14126742-14126501 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 219, 25 |
| Conread position: | 200-451 |
| Cow position: | chr23:16961484-16961227 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 234 |
| Conread position: | 200-451 |
| Cow position: | chr23:19636083-19636329 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 200-451 |
| Cow position: | chr23:29272289-29272046 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 200-456 |
| Cow position: | chr23:26051218-26050962 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 201-378 |
| Cow position: | chr23:347571-347742 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 201-449 |
| Cow position: | chr23:37223895-37224134 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 217, 70 |
| Conread position: | 201-451 |
| Cow position: | chr23:21866919-21866673 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 201-458 |
| Cow position: | chr23:1717371-1717619 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 202-405 |
| Cow position: | chr23:21847932-21847730 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 202-451 |
| Cow position: | chr23:29345581-29345829 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 208-410 |
| Cow position: | chr23:8929969-8930165 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 208-441 |
| Cow position: | chr23:5603107-5603343 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 209-455 |
| Cow position: | chr23:19001898-19002135 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 224-451 |
| Cow position: | chr23:40651317-40651532 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 226-451 |
| Cow position: | chr23:15872539-15872765 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 227-433 |
| Cow position: | chr23:6683901-6683698 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 227-448 |
| Cow position: | chr23:11434109-11434325 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 191, 24 |
| Conread position: | 230-454 |
| Cow position: | chr23:16072195-16072398 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 191, 40 |
| Conread position: | 239-446 |
| Cow position: | chr23:17092357-17092562 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 241-440 |
| Cow position: | chr23:35497889-35498083 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 241-451 |
| Cow position: | chr23:1677533-1677328 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 178, 30 |
| Conread position: | 247-448 |
| Cow position: | chr23:40862479-40862278 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 248-451 |
| Cow position: | chr23:16237125-16237320 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 249-456 |
| Cow position: | chr23:14543092-14543296 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 257-450 |
| Cow position: | chr23:29393554-29393368 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 259-456 |
| Cow position: | chr23:38455055-38455255 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 260-456 |
| Cow position: | chr23:1923716-1923910 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 271-420 |
| Cow position: | chr23:40525874-40526021 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 278-455 |
| Cow position: | chr23:31607052-31607223 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 311-451 |
| Cow position: | chr23:6031947-6031806 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 315-447 |
| Cow position: | chr23:7550586-7550719 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 113 |
Show alignments to all cow chromosomes.