Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 163-451 |
| Cow position: | chr24:37945438-37945726 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 120 |
| Conread position: | 189-448 |
| Cow position: | chr24:16399278-16399524 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 191-451 |
| Cow position: | chr24:32194666-32194414 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 236, 68 |
| Conread position: | 195-454 |
| Cow position: | chr24:6507613-6507866 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 226, 76 |
| Conread position: | 196-451 |
| Cow position: | chr24:30860790-30860542 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 225, 36 |
| Conread position: | 197-420 |
| Cow position: | chr24:14746799-14746583 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 197-451 |
| Cow position: | chr24:15617320-15617566 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 223, 71 |
| Conread position: | 197-452 |
| Cow position: | chr24:32822621-32822869 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 198-341 |
| Cow position: | chr24:15909775-15909633 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 198-438 |
| Cow position: | chr24:22888746-22888507 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 198-456 |
| Cow position: | chr24:27054561-27054308 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 22 |
| Conread position: | 198-456 |
| Cow position: | chr24:31258186-31258436 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 199-350 |
| Cow position: | chr24:41332430-41332579 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-377 |
| Cow position: | chr24:36497583-36497754 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 199-386 |
| Cow position: | chr24:38292008-38291830 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 199-419 |
| Cow position: | chr24:42942966-42943184 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 105, 70 |
| Conread position: | 199-432 |
| Cow position: | chr24:40809214-40809439 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 134, 50 |
| Conread position: | 199-450 |
| Cow position: | chr24:2970454-2970700 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 224, 118 |
| Conread position: | 199-451 |
| Cow position: | chr24:25165188-25164938 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 199-451 |
| Cow position: | chr24:36801533-36801285 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 199-451 |
| Cow position: | chr24:39350072-39350313 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 222, 21 |
| Conread position: | 199-451 |
| Cow position: | chr24:40091433-40091669 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 199-455 |
| Cow position: | chr24:34368854-34369106 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 69 |
| Conread position: | 200-399 |
| Cow position: | chr24:23176549-23176742 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 200-408 |
| Cow position: | chr24:6427855-6427651 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 200-410 |
| Cow position: | chr24:28279775-28279569 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 200-432 |
| Cow position: | chr24:2143901-2143676 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 220, 70 |
| Conread position: | 200-432 |
| Cow position: | chr24:28335411-28335635 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 219, 46 |
| Conread position: | 200-446 |
| Cow position: | chr24:32758610-32758849 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 155, 71 |
| Conread position: | 200-451 |
| Cow position: | chr24:13353197-13352943 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 206 |
| Conread position: | 200-451 |
| Cow position: | chr24:18786777-18787014 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 200-451 |
| Cow position: | chr24:24755600-24755348 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 200-451 |
| Cow position: | chr24:32158123-32158370 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 200-452 |
| Cow position: | chr24:17981337-17981094 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 222, 71 |
| Conread position: | 200-455 |
| Cow position: | chr24:7079935-7079692 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 201-339 |
| Cow position: | chr24:2531732-2531598 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 201-451 |
| Cow position: | chr24:1438121-1438368 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 218, 12 |
| Conread position: | 201-451 |
| Cow position: | chr24:39682002-39681759 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 202-380 |
| Cow position: | chr24:16055361-16055537 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 203-451 |
| Cow position: | chr24:28349732-28349485 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 207-451 |
| Cow position: | chr24:25678172-25677943 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 207-451 |
| Cow position: | chr24:26455986-26455745 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 207-454 |
| Cow position: | chr24:14337873-14337633 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 193, 61 |
| Conread position: | 208-356 |
| Cow position: | chr24:44929493-44929351 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 212-410 |
| Cow position: | chr24:39742955-39742760 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 215-407 |
| Cow position: | chr24:10546208-10546021 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 223-353 |
| Cow position: | chr24:4785545-4785673 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 231-458 |
| Cow position: | chr24:12452905-12452680 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 187, 40 |
| Conread position: | 232-403 |
| Cow position: | chr24:39474283-39474458 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 239-447 |
| Cow position: | chr24:19754685-19754483 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 180, 32 |
| Conread position: | 239-450 |
| Cow position: | chr24:11201534-11201738 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 183, 32 |
| Conread position: | 239-451 |
| Cow position: | chr24:35827850-35827640 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 32 |
| Conread position: | 240-451 |
| Cow position: | chr24:19612119-19611915 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 180, 31 |
| Conread position: | 243-451 |
| Cow position: | chr24:19769601-19769393 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 251-446 |
| Cow position: | chr24:11456740-11456929 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 253-445 |
| Cow position: | chr24:32085833-32086020 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 166, 10 |
| Conread position: | 253-451 |
| Cow position: | chr24:23824322-23824519 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 256-441 |
| Cow position: | chr24:12263617-12263797 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 256-451 |
| Cow position: | chr24:27900824-27900633 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 260-470 |
| Cow position: | chr24:27418011-27418215 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 275-449 |
| Cow position: | chr24:24495762-24495932 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 293-456 |
| Cow position: | chr24:36713815-36713654 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 294-451 |
| Cow position: | chr24:18393464-18393620 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 23 |
| Conread position: | 309-451 |
| Cow position: | chr24:23685022-23685165 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 8 |
Show alignments to all cow chromosomes.