Cow genome map
| Conread name: | LyN1-MLN01E070058 |
| Conread position: | 185-449 |
| Cow position: | chr27:27050140-27049883 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 234, 45 |
| Conread position: | 186-476 |
| Cow position: | chr27:22108440-22108156 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 107, 85 |
| Conread position: | 190-455 |
| Cow position: | chr27:28002052-28001779 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 103 |
| Conread position: | 196-437 |
| Cow position: | chr27:13970602-13970374 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 223, 11 |
| Conread position: | 196-451 |
| Cow position: | chr27:24509601-24509844 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 197-383 |
| Cow position: | chr27:11762921-11762741 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 197-451 |
| Cow position: | chr27:24225119-24224865 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 185, 23 |
| Conread position: | 198-352 |
| Cow position: | chr27:1899793-1899642 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 198-438 |
| Cow position: | chr27:19544142-19543904 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 198-451 |
| Cow position: | chr27:19083939-19083687 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 198-451 |
| Cow position: | chr27:27053083-27053323 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 224, 22 |
| Conread position: | 198-456 |
| Cow position: | chr27:13005627-13005872 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 199-398 |
| Cow position: | chr27:10119304-10119103 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 72 |
| Conread position: | 199-441 |
| Cow position: | chr27:20766174-20765941 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 199-443 |
| Cow position: | chr27:15524028-15523779 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 199-449 |
| Cow position: | chr27:14937650-14937402 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 199-451 |
| Cow position: | chr27:1536948-1536690 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 129, 72 |
| Conread position: | 199-451 |
| Cow position: | chr27:2847633-2847880 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 199-451 |
| Cow position: | chr27:8048952-8048715 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 199-451 |
| Cow position: | chr27:8430660-8430411 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 71 |
| Conread position: | 199-452 |
| Cow position: | chr27:6159767-6160010 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 223, 11 |
| Conread position: | 200-381 |
| Cow position: | chr27:11746368-11746547 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-387 |
| Cow position: | chr27:16526061-16525880 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 200-408 |
| Cow position: | chr27:13958563-13958358 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 200-424 |
| Cow position: | chr27:25970187-25970401 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 200-428 |
| Cow position: | chr27:25982938-25982722 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 200-447 |
| Cow position: | chr27:20749241-20748984 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 100 |
| Conread position: | 200-450 |
| Cow position: | chr27:26441268-26441035 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-451 |
| Cow position: | chr27:12244346-12244098 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 200-455 |
| Cow position: | chr27:490684-490927 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 223, 6 |
| Conread position: | 200-456 |
| Cow position: | chr27:29039160-29038907 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 200-457 |
| Cow position: | chr27:12247467-12247710 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 201-406 |
| Cow position: | chr27:23662812-23662613 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 201-426 |
| Cow position: | chr27:21578794-21578573 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 201-451 |
| Cow position: | chr27:22225807-22225568 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 202-389 |
| Cow position: | chr27:25879884-25880068 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 202-451 |
| Cow position: | chr27:6453990-6454238 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 202-451 |
| Cow position: | chr27:11356749-11356512 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 217, 13 |
| Conread position: | 207-410 |
| Cow position: | chr27:21393725-21393519 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 207-443 |
| Cow position: | chr27:30365105-30365337 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 211, 67 |
| Conread position: | 210-451 |
| Cow position: | chr27:783496-783729 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 220-451 |
| Cow position: | chr27:27233819-27234049 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 224-389 |
| Cow position: | chr27:24333813-24333655 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 224-451 |
| Cow position: | chr27:25998505-25998730 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 225-455 |
| Cow position: | chr27:21681520-21681293 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 230-450 |
| Cow position: | chr27:8272820-8273040 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 234-449 |
| Cow position: | chr27:13977732-13977516 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 240-445 |
| Cow position: | chr27:21138650-21138843 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 242-410 |
| Cow position: | chr27:6883855-6884021 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 251-450 |
| Cow position: | chr27:27842075-27841879 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 170, 5 |
| Conread position: | 251-451 |
| Cow position: | chr27:19648112-19647912 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 170, 20 |
| Conread position: | 256-435 |
| Cow position: | chr27:22781883-22782057 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 269-439 |
| Cow position: | chr27:2640128-2639962 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 271-451 |
| Cow position: | chr27:19660781-19660962 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 314-454 |
| Cow position: | chr27:25471031-25471171 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 88 |
Show alignments to all cow chromosomes.