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Cow genome map

           
Conread name:
           
LyN1-MLN01F010092
        

               
Conread position:
               
88-673
               

               
Cow position:
               
chr10:38014695-38014114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 268
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr10:35026964-35026727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr10:25475785-25475558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
182-686
               

               
Cow position:
               
chr10:35796106-35796586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
206-673
               

               
Cow position:
               
chr10:45728753-45729181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 26
               

               
Conread position:
               
207-664
               

               
Cow position:
               
chr10:22396479-22396005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
208-522
               

               
Cow position:
               
chr10:55395769-55396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
228-668
               

               
Cow position:
               
chr10:37708837-37709292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 90
               

               
Conread position:
               
230-673
               

               
Cow position:
               
chr10:41397663-41397221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 204
               

               
Conread position:
               
230-675
               

               
Cow position:
               
chr10:29627775-29628211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 134
               

               
Conread position:
               
231-504
               

               
Cow position:
               
chr10:24448045-24447773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
233-674
               

               
Cow position:
               
chr10:17844948-17844508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
233-675
               

               
Cow position:
               
chr10:37286987-37287438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
233-686
               

               
Cow position:
               
chr10:62114868-62114425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
234-378
               

               
Cow position:
               
chr10:48130197-48130056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
234-392
               

               
Cow position:
               
chr10:1417774-1417622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
234-399
               

               
Cow position:
               
chr10:25142353-25142518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
234-405
               

               
Cow position:
               
chr10:34903657-34903488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
234-417
               

               
Cow position:
               
chr10:18154273-18154085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
234-418
               

               
Cow position:
               
chr10:27544634-27544452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr10:28223399-28223208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr10:36855945-36856137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr10:57095021-57095206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
234-428
               

               
Cow position:
               
chr10:37971944-37971759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
234-458
               

               
Cow position:
               
chr10:16830202-16830429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
234-460
               

               
Cow position:
               
chr10:39258308-39258539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 133
               

               
Conread position:
               
234-465
               

               
Cow position:
               
chr10:41676231-41676461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
234-476
               

               
Cow position:
               
chr10:39622181-39622414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
180, 130
               

               
Conread position:
               
234-478
               

               
Cow position:
               
chr10:10027757-10027512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 118
               

               
Conread position:
               
234-526
               

               
Cow position:
               
chr10:22888635-22888926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
234-528
               

               
Cow position:
               
chr10:21923336-21923631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
234-529
               

               
Cow position:
               
chr10:36531542-36531845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 124
               

               
Conread position:
               
234-530
               

               
Cow position:
               
chr10:61509763-61510056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr10:15248857-15249166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr10:37068238-37068540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
241, 93
               

               
Conread position:
               
234-561
               

               
Cow position:
               
chr10:53076313-53075971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 217
               

               
Conread position:
               
234-579
               

               
Cow position:
               
chr10:44764310-44764673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
234-589
               

               
Cow position:
               
chr10:45965677-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
234-605
               

               
Cow position:
               
chr10:20391252-20391640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
234-621
               

               
Cow position:
               
chr10:17022386-17022764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
234-623
               

               
Cow position:
               
chr10:23096588-23096992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
234-671
               

               
Cow position:
               
chr10:45371241-45370798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
234-671
               

               
Cow position:
               
chr10:47543253-47542834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
234-672
               

               
Cow position:
               
chr10:1978489-1978921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 100
               

               
Conread position:
               
234-672
               

               
Cow position:
               
chr10:35731344-35731784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr10:1976137-1976579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr10:9288210-9287808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr10:17073184-17073612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 98
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr10:37529091-37529528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 85
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr10:39398337-39398777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
234-674
               

               
Cow position:
               
chr10:14816977-14817424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
234-674
               

               
Cow position:
               
chr10:33163911-33163449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
234-675
               

               
Cow position:
               
chr10:63276572-63276130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
234-689
               

               
Cow position:
               
chr10:34898139-34897723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
235-379
               

               
Cow position:
               
chr10:32440383-32440238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
235-446
               

               
Cow position:
               
chr10:5784070-5784287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
235-454
               

               
Cow position:
               
chr10:27136504-27136727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
235-480
               

               
Cow position:
               
chr10:37425957-37426198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 14
               

               
Conread position:
               
235-506
               

               
Cow position:
               
chr10:60491080-60491350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
235-539
               

               
Cow position:
               
chr10:4151738-4151422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr10:48407314-48407005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
235-645
               

               
Cow position:
               
chr10:69564787-69564372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
235-670
               

               
Cow position:
               
chr10:10148831-10148394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
235-673
               

               
Cow position:
               
chr10:24871352-24870906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
235-673
               

               
Cow position:
               
chr10:49146689-49146274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 39
               

               
Conread position:
               
235-673
               

               
Cow position:
               
chr10:49846956-49846517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
235-675
               

               
Cow position:
               
chr10:23506308-23506746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
236-368
               

               
Cow position:
               
chr10:26607437-26607566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr10:22972823-22972999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
236-421
               

               
Cow position:
               
chr10:42115535-42115355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
236-429
               

               
Cow position:
               
chr10:40933944-40933745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
236-430
               

               
Cow position:
               
chr10:55043460-55043658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
236-450
               

               
Cow position:
               
chr10:37174274-37174487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
236-452
               

               
Cow position:
               
chr10:35637961-35638176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
236-474
               

               
Cow position:
               
chr10:55599973-55600215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
236-477
               

               
Cow position:
               
chr10:763087-762853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr10:60446912-60446612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr10:58451198-58451499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
236-545
               

               
Cow position:
               
chr10:3364006-3364313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
236-572
               

               
Cow position:
               
chr10:19191934-19191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
236-634
               

               
Cow position:
               
chr10:1996493-1996885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
236-652
               

               
Cow position:
               
chr10:43531447-43531015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
236-668
               

               
Cow position:
               
chr10:5151532-5151097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
236-672
               

               
Cow position:
               
chr10:19104002-19104435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
236-672
               

               
Cow position:
               
chr10:55733429-55733857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 78
               

               
Conread position:
               
236-673
               

               
Cow position:
               
chr10:6852442-6852013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
236-673
               

               
Cow position:
               
chr10:8277735-8277283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
236-673
               

               
Cow position:
               
chr10:15817616-15818055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
236-673
               

               
Cow position:
               
chr10:39228345-39227898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 215
               

               
Conread position:
               
236-674
               

               
Cow position:
               
chr10:40107284-40106856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
236-684
               

               
Cow position:
               
chr10:38370272-38370733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
236-691
               

               
Cow position:
               
chr10:37512059-37512526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr10:29328219-29328500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
182, 13
               

               
Conread position:
               
237-539
               

               
Cow position:
               
chr10:45294960-45295264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr10:66365483-66365166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
237-602
               

               
Cow position:
               
chr10:2613545-2613175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 12
               

               
Conread position:
               
237-609
               

               
Cow position:
               
chr10:19709563-19709162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
237-652
               

               
Cow position:
               
chr10:55051061-55050632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
237-664
               

               
Cow position:
               
chr10:11009598-11009174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
237-673
               

               
Cow position:
               
chr10:42313086-42312649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
238-402
               

               
Cow position:
               
chr10:18849701-18849538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-405
               

               
Cow position:
               
chr10:38329826-38329655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
238-422
               

               
Cow position:
               
chr10:2328369-2328183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
238-422
               

               
Cow position:
               
chr10:19503102-19503289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
238-423
               

               
Cow position:
               
chr10:44758986-44758804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-426
               

               
Cow position:
               
chr10:6719155-6718965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
238-436
               

               
Cow position:
               
chr10:17518667-17518868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
238-445
               

               
Cow position:
               
chr10:50050076-50049880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr10:47159383-47159166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
238-465
               

               
Cow position:
               
chr10:22980801-22981028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
177, 81
               

               
Conread position:
               
238-472
               

               
Cow position:
               
chr10:35248962-35249191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
238-479
               

               
Cow position:
               
chr10:43586105-43586348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
238-482
               

               
Cow position:
               
chr10:25822076-25822310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chr10:35715408-35715690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
238-521
               

               
Cow position:
               
chr10:48178517-48178247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 12
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr10:63484815-63484532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr10:19539647-19539934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr10:33881601-33881906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 238
               

               
Conread position:
               
238-539
               

               
Cow position:
               
chr10:45623997-45624274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 27
               

               
Conread position:
               
238-594
               

               
Cow position:
               
chr10:11463482-11463850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
238-610
               

               
Cow position:
               
chr10:7291637-7291996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
238-613
               

               
Cow position:
               
chr10:40738168-40737800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 16
               

               
Conread position:
               
238-631
               

               
Cow position:
               
chr10:37765216-37764799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
238-663
               

               
Cow position:
               
chr10:61588079-61588510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
238-667
               

               
Cow position:
               
chr10:38944437-38944006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
238-671
               

               
Cow position:
               
chr10:56733206-56732789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
238-672
               

               
Cow position:
               
chr10:28176223-28176651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 53
               

               
Conread position:
               
238-672
               

               
Cow position:
               
chr10:48316765-48317213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 199
               

               
Conread position:
               
238-672
               

               
Cow position:
               
chr10:56475632-56475211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr10:16093389-16092956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 175
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr10:44771824-44771397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
177, 8
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr10:67442943-67443364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 11
               

               
Conread position:
               
238-675
               

               
Cow position:
               
chr10:34607743-34607297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 289
               

               
Conread position:
               
238-675
               

               
Cow position:
               
chr10:64285621-64286058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 72
               

               
Conread position:
               
238-686
               

               
Cow position:
               
chr10:19394388-19394851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
238-696
               

               
Cow position:
               
chr10:36490196-36489739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
239-404
               

               
Cow position:
               
chr10:58066010-58066176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
239-408
               

               
Cow position:
               
chr10:19403091-19402918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
239-415
               

               
Cow position:
               
chr10:52152975-52152797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr10:9959396-9959212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr10:39140486-39140314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr10:58807571-58807748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
239-426
               

               
Cow position:
               
chr10:14732797-14732617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr10:16641752-16641946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
239-446
               

               
Cow position:
               
chr10:27178664-27178465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
239-462
               

               
Cow position:
               
chr10:48377217-48377444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 160
               

               
Conread position:
               
239-464
               

               
Cow position:
               
chr10:10153182-10152961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
239-482
               

               
Cow position:
               
chr10:17567927-17568167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
239-519
               

               
Cow position:
               
chr10:46934600-46934889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
239-539
               

               
Cow position:
               
chr10:24004285-24004594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
239-539
               

               
Cow position:
               
chr10:52881439-52881744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr10:41132440-41132131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
239-579
               

               
Cow position:
               
chr10:9656347-9656709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
176, 85
               

               
Conread position:
               
239-587
               

               
Cow position:
               
chr10:69587505-69587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
239-652
               

               
Cow position:
               
chr10:53907549-53907956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
239-669
               

               
Cow position:
               
chr10:10048855-10048426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
239-669
               

               
Cow position:
               
chr10:27716659-27717097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr10:2462300-2462735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr10:22341752-22341308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 85
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr10:37014814-37014382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
239-672
               

               
Cow position:
               
chr10:48259067-48259489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:16598869-16598430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 187
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:20371954-20372390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:22049446-22048994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:24312714-24313148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 85
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:33215970-33215538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:43439032-43438611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
178, 45
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:52569773-52569336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 286
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr10:54848955-54848519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 89
               

               
Conread position:
               
239-674
               

               
Cow position:
               
chr10:24560811-24561247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
239-674
               

               
Cow position:
               
chr10:68182783-68183191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr10:11081150-11080697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 294
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr10:41408444-41408026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 87
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr10:43487893-43487450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr10:57033619-57034051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr10:69934605-69935038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 37
               

               
Conread position:
               
239-676
               

               
Cow position:
               
chr10:25936417-25935982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
239-691
               

               
Cow position:
               
chr10:65071499-65071034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
239-730
               

               
Cow position:
               
chr10:52296674-52296182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 176
               

               
Conread position:
               
240-392
               

               
Cow position:
               
chr10:24035842-24035995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
240-395
               

               
Cow position:
               
chr10:10104956-10104803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
240-396
               

               
Cow position:
               
chr10:28259356-28259509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr10:14668575-14668410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-410
               

               
Cow position:
               
chr10:55270839-55271018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr10:55069383-55069214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
240-415
               

               
Cow position:
               
chr10:18751299-18751473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr10:3986067-3985890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr10:15383507-15383327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr10:30836855-30837036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:11047028-11047210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:23478763-23478932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:37375568-37375754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:48353765-48353940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 45
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:58148993-58149175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
175, 88
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr10:64877529-64877716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr10:24915542-24915727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
240-429
               

               
Cow position:
               
chr10:24971154-24971341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
240-429
               

               
Cow position:
               
chr10:59417061-59417250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
240-430
               

               
Cow position:
               
chr10:10829218-10829027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
178, 108
               

               
Conread position:
               
240-430
               

               
Cow position:
               
chr10:19679282-19679082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
240-430
               

               
Cow position:
               
chr10:53563941-53564136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
240-431
               

               
Cow position:
               
chr10:38195797-38195989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
240-432
               

               
Cow position:
               
chr10:49029825-49029637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 87
               

               
Conread position:
               
240-439
               

               
Cow position:
               
chr10:40999034-40998835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
144, 94
               

               
Conread position:
               
240-440
               

               
Cow position:
               
chr10:49862640-49862445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
165, 79
               

               
Conread position:
               
240-441
               

               
Cow position:
               
chr10:9797736-9797933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr10:20448095-20447884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
240-460
               

               
Cow position:
               
chr10:52125516-52125729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
240-464
               

               
Cow position:
               
chr10:23310849-23311076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 169
               

               
Conread position:
               
240-466
               

               
Cow position:
               
chr10:16944637-16944421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
240-467
               

               
Cow position:
               
chr10:24830895-24831135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
240-467
               

               
Cow position:
               
chr10:50042795-50042556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
67, 194
               

               
Conread position:
               
240-468
               

               
Cow position:
               
chr10:14093073-14093295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
240-474
               

               
Cow position:
               
chr10:32080444-32080217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
240-474
               

               
Cow position:
               
chr10:45623612-45623845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
240-475
               

               
Cow position:
               
chr10:20485383-20485618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
240-478
               

               
Cow position:
               
chr10:32929163-32928912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
240-480
               

               
Cow position:
               
chr10:43272864-43273111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
240-481
               

               
Cow position:
               
chr10:7309271-7309524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
240-494
               

               
Cow position:
               
chr10:5465626-5465886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
240-503
               

               
Cow position:
               
chr10:23390142-23390405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
240-506
               

               
Cow position:
               
chr10:23346130-23346395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 93
               

               
Conread position:
               
240-535
               

               
Cow position:
               
chr10:19099006-19098717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
240-541
               

               
Cow position:
               
chr10:42230981-42230666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
240-573
               

               
Cow position:
               
chr10:2201958-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
240-577
               

               
Cow position:
               
chr10:38241256-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
240-592
               

               
Cow position:
               
chr10:63884122-63883771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 195
               

               
Conread position:
               
240-597
               

               
Cow position:
               
chr10:47690574-47690207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
240-600
               

               
Cow position:
               
chr10:4184380-4184002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
240-600
               

               
Cow position:
               
chr10:32834987-32834628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
182, 9
               

               
Conread position:
               
240-605
               

               
Cow position:
               
chr10:30787448-30787808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
240-605
               

               
Cow position:
               
chr10:35653845-35653469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
240-614
               

               
Cow position:
               
chr10:66199529-66199905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
240-617
               

               
Cow position:
               
chr10:24756585-24756210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 33
               

               
Conread position:
               
240-633
               

               
Cow position:
               
chr10:35245776-35246162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
240-634
               

               
Cow position:
               
chr10:31534915-31534521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 237
               

               
Conread position:
               
240-645
               

               
Cow position:
               
chr10:6436234-6435828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 73
               

               
Conread position:
               
240-648
               

               
Cow position:
               
chr10:45378824-45379242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 198
               

               
Conread position:
               
240-649
               

               
Cow position:
               
chr10:28841129-28840718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
240-650
               

               
Cow position:
               
chr10:37415960-37415549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
240-652
               

               
Cow position:
               
chr10:60721977-60722382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
240-654
               

               
Cow position:
               
chr10:62220016-62219584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 295
               

               
Conread position:
               
240-655
               

               
Cow position:
               
chr10:8404383-8403968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
240-663
               

               
Cow position:
               
chr10:5889582-5890019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
240-663
               

               
Cow position:
               
chr10:59009962-59010390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 54
               

               
Conread position:
               
240-666
               

               
Cow position:
               
chr10:50558753-50559179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
240-670
               

               
Cow position:
               
chr10:23055916-23056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
240-670
               

               
Cow position:
               
chr10:54947967-54948385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr10:2185534-2185075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr10:31027464-31027901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 197
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr10:31400722-31401155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr10:50360105-50359656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr10:22616464-22616901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr10:51289421-51288996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr10:60236923-60237373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:2449529-2449094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:5599822-5600252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 99
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:10751810-10752239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 192
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:13586880-13586455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:15319080-15318629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 197
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:19372157-19372587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:34654934-34655370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:39874964-39875404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 203
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr10:58557342-58556937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 12
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:13764987-13765424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 194
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:15868433-15867975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 288
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:51306513-51306066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 72
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:51944535-51944102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:53179439-53179043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:57461530-57461105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 83
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr10:62286742-62286291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 203
               

               
Conread position:
               
240-675
               

               
Cow position:
               
chr10:32775284-32774854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 241
               

               
Conread position:
               
240-676
               

               
Cow position:
               
chr10:16414398-16414849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
180, 117
               

               
Conread position:
               
240-677
               

               
Cow position:
               
chr10:64042261-64041820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
240-678
               

               
Cow position:
               
chr10:28721956-28721527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 117
               

               
Conread position:
               
240-684
               

               
Cow position:
               
chr10:21082547-21082125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
240-686
               

               
Cow position:
               
chr10:9575872-9576311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 94
               

               
Conread position:
               
240-686
               

               
Cow position:
               
chr10:20095944-20095483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 201
               

               
Conread position:
               
240-689
               

               
Cow position:
               
chr10:40163757-40164207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 87
               

               
Conread position:
               
241-405
               

               
Cow position:
               
chr10:47429999-47429838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr10:14542048-14541866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
241-422
               

               
Cow position:
               
chr10:28843536-28843352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
241-422
               

               
Cow position:
               
chr10:44513085-44513268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
241-461
               

               
Cow position:
               
chr10:30261431-30261648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
241-468
               

               
Cow position:
               
chr10:30121590-30121353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
241-468
               

               
Cow position:
               
chr10:38995410-38995176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
241-468
               

               
Cow position:
               
chr10:60697453-60697676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
241-474
               

               
Cow position:
               
chr10:35605219-35604990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
241-475
               

               
Cow position:
               
chr10:1054563-1054347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
241-602
               

               
Cow position:
               
chr10:4148667-4148288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
241-605
               

               
Cow position:
               
chr10:10120362-10120004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 8
               

               
Conread position:
               
241-626
               

               
Cow position:
               
chr10:25150063-25149687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
241-637
               

               
Cow position:
               
chr10:45476043-45476441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
241-667
               

               
Cow position:
               
chr10:57059098-57059534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
241-670
               

               
Cow position:
               
chr10:22390773-22390333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
241-671
               

               
Cow position:
               
chr10:6490054-6489609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 200
               

               
Conread position:
               
241-671
               

               
Cow position:
               
chr10:37235373-37235811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr10:38133305-38133742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr10:58691077-58690645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr10:62353632-62353207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
241-674
               

               
Cow position:
               
chr10:34661156-34661577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
241-683
               

               
Cow position:
               
chr10:46151045-46150615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
242-417
               

               
Cow position:
               
chr10:15602003-15602181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
242-430
               

               
Cow position:
               
chr10:2984891-2985088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
242-430
               

               
Cow position:
               
chr10:65904415-65904230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
242-439
               

               
Cow position:
               
chr10:43459879-43460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 86
               

               
Conread position:
               
242-471
               

               
Cow position:
               
chr10:704812-705051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 204
               

               
Conread position:
               
242-475
               

               
Cow position:
               
chr10:6242348-6242569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
242-506
               

               
Cow position:
               
chr10:34646281-34646540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
175, 32
               

               
Conread position:
               
242-517
               

               
Cow position:
               
chr10:55382492-55382211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
242-534
               

               
Cow position:
               
chr10:61921968-61922258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
224, 186
               

               
Conread position:
               
242-538
               

               
Cow position:
               
chr10:31004841-31005142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
242-539
               

               
Cow position:
               
chr10:27118788-27119091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
242-539
               

               
Cow position:
               
chr10:46327865-46327564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
242-540
               

               
Cow position:
               
chr10:48679090-48679388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
242-551
               

               
Cow position:
               
chr10:34674189-34673884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
182, 82
               

               
Conread position:
               
242-578
               

               
Cow position:
               
chr10:6531991-6532319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
238, 31
               

               
Conread position:
               
242-615
               

               
Cow position:
               
chr10:68927322-68926953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
242-617
               

               
Cow position:
               
chr10:8161681-8161301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
242-631
               

               
Cow position:
               
chr10:44730299-44730698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
82, 186
               

               
Conread position:
               
242-663
               

               
Cow position:
               
chr10:47773895-47773485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
242-667
               

               
Cow position:
               
chr10:54504778-54504349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
242-670
               

               
Cow position:
               
chr10:63940946-63940519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
242-671
               

               
Cow position:
               
chr10:14947428-14947010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 92
               

               
Conread position:
               
242-672
               

               
Cow position:
               
chr10:29166455-29166020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:8093149-8093574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 7
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:13311919-13311473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 185
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:23576715-23576284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:25342757-25342332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:30353025-30352585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr10:35792103-35791674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 188
               

               
Conread position:
               
242-674
               

               
Cow position:
               
chr10:60961121-60960680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
242-675
               

               
Cow position:
               
chr10:11966669-11967107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
243-462
               

               
Cow position:
               
chr10:38205543-38205757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
174, 77
               

               
Conread position:
               
243-465
               

               
Cow position:
               
chr10:10634386-10634169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
243-504
               

               
Cow position:
               
chr10:58043953-58044220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 196
               

               
Conread position:
               
243-671
               

               
Cow position:
               
chr10:57786510-57786080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 79
               

               
Conread position:
               
243-674
               

               
Cow position:
               
chr10:31362045-31362470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 65
               

               
Conread position:
               
243-674
               

               
Cow position:
               
chr10:37818382-37818820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
245-412
               

               
Cow position:
               
chr10:7089512-7089352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
245-422
               

               
Cow position:
               
chr10:12253264-12253435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
245-429
               

               
Cow position:
               
chr10:24862930-24863118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
245-455
               

               
Cow position:
               
chr10:6516875-6516658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
245-457
               

               
Cow position:
               
chr10:17389027-17388799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
245-462
               

               
Cow position:
               
chr10:49634237-49634020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
169, 65
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr10:31803306-31803563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr10:10138032-10137773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
173, 68
               

               
Conread position:
               
245-519
               

               
Cow position:
               
chr10:33573075-33573345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
245-528
               

               
Cow position:
               
chr10:39124307-39124017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 171
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr10:6664202-6663903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
245-592
               

               
Cow position:
               
chr10:24422000-24422340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
245-617
               

               
Cow position:
               
chr10:46195952-46195574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
245-650
               

               
Cow position:
               
chr10:28152224-28152619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
245-671
               

               
Cow position:
               
chr10:50533706-50534130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 40
               

               
Conread position:
               
245-672
               

               
Cow position:
               
chr10:32417515-32417106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
190, 28
               

               
Conread position:
               
245-673
               

               
Cow position:
               
chr10:5543077-5543508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
245-673
               

               
Cow position:
               
chr10:35862060-35862489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
245-673
               

               
Cow position:
               
chr10:39387620-39387200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
245-673
               

               
Cow position:
               
chr10:48462175-48462597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
245-674
               

               
Cow position:
               
chr10:10469135-10468718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
245-675
               

               
Cow position:
               
chr10:4311333-4310927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
246-431
               

               
Cow position:
               
chr10:58638176-58637997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
169, 28
               

               
Conread position:
               
246-444
               

               
Cow position:
               
chr10:3276139-3275947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 64
               

               
Conread position:
               
246-450
               

               
Cow position:
               
chr10:11112793-11112589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
246-452
               

               
Cow position:
               
chr10:2857218-2857011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr10:54776717-54776485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
246-551
               

               
Cow position:
               
chr10:7383446-7383745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 81
               

               
Conread position:
               
246-670
               

               
Cow position:
               
chr10:55122980-55122534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
246-673
               

               
Cow position:
               
chr10:59572063-59571639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 63
               

               
Conread position:
               
248-673
               

               
Cow position:
               
chr10:40420686-40421104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
249-409
               

               
Cow position:
               
chr10:29713318-29713153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
249-413
               

               
Cow position:
               
chr10:17065813-17065650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
249-521
               

               
Cow position:
               
chr10:30216549-30216814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
168, 85
               

               
Conread position:
               
249-522
               

               
Cow position:
               
chr10:33084261-33084544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
249-665
               

               
Cow position:
               
chr10:35867849-35868252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 184
               

               
Conread position:
               
249-671
               

               
Cow position:
               
chr10:25699829-25699406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
249-672
               

               
Cow position:
               
chr10:49923198-49923613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
249-673
               

               
Cow position:
               
chr10:721458-721040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
249-673
               

               
Cow position:
               
chr10:18042350-18041926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
249-673
               

               
Cow position:
               
chr10:30460836-30460386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 188
               

               
Conread position:
               
249-698
               

               
Cow position:
               
chr10:54731192-54730729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
250-411
               

               
Cow position:
               
chr10:36864526-36864374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
250-468
               

               
Cow position:
               
chr10:23341060-23340853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
250-469
               

               
Cow position:
               
chr10:41116067-41115851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
250-472
               

               
Cow position:
               
chr10:23071575-23071802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr10:17150039-17149820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
250-596
               

               
Cow position:
               
chr10:52695560-52695914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 84
               

               
Conread position:
               
250-672
               

               
Cow position:
               
chr10:24753303-24752898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
250-674
               

               
Cow position:
               
chr10:21657579-21657160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 41
               

               
Conread position:
               
250-674
               

               
Cow position:
               
chr10:30522897-30523317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 83
               

               
Conread position:
               
250-674
               

               
Cow position:
               
chr10:42746077-42745652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
250-674
               

               
Cow position:
               
chr10:49168861-49169317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
251-473
               

               
Cow position:
               
chr10:30929719-30929947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
251-480
               

               
Cow position:
               
chr10:55319659-55319432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
251-667
               

               
Cow position:
               
chr10:33195211-33194768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 286
               

               
Conread position:
               
251-667
               

               
Cow position:
               
chr10:57142038-57142473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 189
               

               
Conread position:
               
251-671
               

               
Cow position:
               
chr10:10985346-10985752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
276, 35
               

               
Conread position:
               
251-671
               

               
Cow position:
               
chr10:50182888-50183304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 73
               

               
Conread position:
               
252-405
               

               
Cow position:
               
chr10:4329828-4329985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr10:37507987-37508153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
252-667
               

               
Cow position:
               
chr10:42637394-42636971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
252-673
               

               
Cow position:
               
chr10:33914903-33915310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
166, 67
               

               
Conread position:
               
252-675
               

               
Cow position:
               
chr10:46830034-46829614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 120
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr10:62454203-62454410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
253-464
               

               
Cow position:
               
chr10:21564913-21564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
253-505
               

               
Cow position:
               
chr10:13918108-13918343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
228, 23
               

               
Conread position:
               
253-521
               

               
Cow position:
               
chr10:46262348-46262081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
253-596
               

               
Cow position:
               
chr10:61982554-61982208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
253-673
               

               
Cow position:
               
chr10:40147466-40147894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
253-673
               

               
Cow position:
               
chr10:48257112-48257538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
253-673
               

               
Cow position:
               
chr10:53674991-53674564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
253-674
               

               
Cow position:
               
chr10:19895558-19895139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
254-412
               

               
Cow position:
               
chr10:4170523-4170687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
254-429
               

               
Cow position:
               
chr10:49382800-49382970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
254-431
               

               
Cow position:
               
chr10:17448046-17448215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
254-469
               

               
Cow position:
               
chr10:48619851-48620065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
254-595
               

               
Cow position:
               
chr10:37534752-37534420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
254-674
               

               
Cow position:
               
chr10:56828157-56828581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
254-688
               

               
Cow position:
               
chr10:5503185-5502748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
255-670
               

               
Cow position:
               
chr10:7366630-7367042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
257-478
               

               
Cow position:
               
chr10:17691077-17691290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
257-522
               

               
Cow position:
               
chr10:15309249-15309510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
257-619
               

               
Cow position:
               
chr10:24276570-24276940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
257-642
               

               
Cow position:
               
chr10:45871678-45871286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 195
               

               
Conread position:
               
257-672
               

               
Cow position:
               
chr10:23912352-23912754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
257-673
               

               
Cow position:
               
chr10:9675313-9675715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 17
               

               
Conread position:
               
257-673
               

               
Cow position:
               
chr10:26577715-26577291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 246
               

               
Conread position:
               
257-674
               

               
Cow position:
               
chr10:1423992-1423571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 179
               

               
Conread position:
               
257-675
               

               
Cow position:
               
chr10:33666002-33665579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
258-551
               

               
Cow position:
               
chr10:44421743-44422042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
258-673
               

               
Cow position:
               
chr10:6505511-6505102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
259-441
               

               
Cow position:
               
chr10:14188454-14188637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
159, 69
               

               
Conread position:
               
259-505
               

               
Cow position:
               
chr10:47182408-47182656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
259-673
               

               
Cow position:
               
chr10:1488986-1488590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
259-673
               

               
Cow position:
               
chr10:35802206-35802628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 14
               

               
Conread position:
               
260-518
               

               
Cow position:
               
chr10:46575663-46575404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
260-536
               

               
Cow position:
               
chr10:68572513-68572232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
261-602
               

               
Cow position:
               
chr10:48512922-48513275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
261-667
               

               
Cow position:
               
chr10:10720516-10720929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
262-428
               

               
Cow position:
               
chr10:59159408-59159229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr10:58488357-58488136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
262-673
               

               
Cow position:
               
chr10:32503586-32503191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 177
               

               
Conread position:
               
263-430
               

               
Cow position:
               
chr10:17077587-17077753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
263-494
               

               
Cow position:
               
chr10:15225121-15224885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
263-528
               

               
Cow position:
               
chr10:10026490-10026245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
265-470
               

               
Cow position:
               
chr10:2695111-2694910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
265-675
               

               
Cow position:
               
chr10:24096217-24096640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
265-675
               

               
Cow position:
               
chr10:38942587-38942165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 214
               

               
Conread position:
               
270-673
               

               
Cow position:
               
chr10:28395159-28395551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
272-587
               

               
Cow position:
               
chr10:37295526-37295839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
272-673
               

               
Cow position:
               
chr10:21422017-21422412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 57
               

               
Conread position:
               
272-673
               

               
Cow position:
               
chr10:52278869-52278462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
280-469
               

               
Cow position:
               
chr10:46886287-46886103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
280-539
               

               
Cow position:
               
chr10:10750109-10750377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
281-673
               

               
Cow position:
               
chr10:49455956-49456335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
287-673
               

               
Cow position:
               
chr10:6235319-6235682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
287-673
               

               
Cow position:
               
chr10:6408086-6407697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
294-458
               

               
Cow position:
               
chr10:24574281-24574438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
295-672
               

               
Cow position:
               
chr10:65133064-65132701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
297-671
               

               
Cow position:
               
chr10:11213235-11212855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
298-558
               

               
Cow position:
               
chr10:49253486-49253225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
298-585
               

               
Cow position:
               
chr10:4164388-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
300-671
               

               
Cow position:
               
chr10:63628304-63627956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
301-616
               

               
Cow position:
               
chr10:37913064-37913387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
302-575
               

               
Cow position:
               
chr10:16683688-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
302-670
               

               
Cow position:
               
chr10:36002316-36001948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
302-673
               

               
Cow position:
               
chr10:47789137-47788785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
302-673
               

               
Cow position:
               
chr10:58259409-58259774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
304-673
               

               
Cow position:
               
chr10:39109903-39110253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
307-675
               

               
Cow position:
               
chr10:31791147-31791521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
307-696
               

               
Cow position:
               
chr10:29252275-29251881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
308-506
               

               
Cow position:
               
chr10:53405581-53405384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
308-540
               

               
Cow position:
               
chr10:15426973-15427192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
308-672
               

               
Cow position:
               
chr10:15115721-15115357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
308-674
               

               
Cow position:
               
chr10:59675142-59675513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
310-481
               

               
Cow position:
               
chr10:13197723-13197897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
310-484
               

               
Cow position:
               
chr10:24902878-24903053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
310-514
               

               
Cow position:
               
chr10:23583464-23583669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
310-615
               

               
Cow position:
               
chr10:35778796-35779106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
310-625
               

               
Cow position:
               
chr10:24375650-24375338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
310-667
               

               
Cow position:
               
chr10:61839689-61839347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
310-667
               

               
Cow position:
               
chr10:67581393-67581037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
310-669
               

               
Cow position:
               
chr10:11248086-11247719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
310-671
               

               
Cow position:
               
chr10:50609660-50609282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
310-672
               

               
Cow position:
               
chr10:31373980-31374364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
310-673
               

               
Cow position:
               
chr10:77476-77131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
310-673
               

               
Cow position:
               
chr10:34174870-34175255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
310-673
               

               
Cow position:
               
chr10:59663864-59664222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr10:668972-668622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
310-684
               

               
Cow position:
               
chr10:24732411-24732040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
311-528
               

               
Cow position:
               
chr10:49947776-49947990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
311-609
               

               
Cow position:
               
chr10:28429395-28429692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
311-670
               

               
Cow position:
               
chr10:34660137-34660475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
311-670
               

               
Cow position:
               
chr10:43509105-43508739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
311-671
               

               
Cow position:
               
chr10:23886353-23886705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
311-671
               

               
Cow position:
               
chr10:29919733-29920089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
311-671
               

               
Cow position:
               
chr10:59843803-59844180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
311-672
               

               
Cow position:
               
chr10:24022178-24022538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
311-673
               

               
Cow position:
               
chr10:26209142-26209520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
313-504
               

               
Cow position:
               
chr10:56180668-56180476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
313-518
               

               
Cow position:
               
chr10:41760218-41760426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
313-579
               

               
Cow position:
               
chr10:67288394-67288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
313-602
               

               
Cow position:
               
chr10:19549385-19549681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
313-672
               

               
Cow position:
               
chr10:20132425-20132785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
313-673
               

               
Cow position:
               
chr10:30360622-30360271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
314-469
               

               
Cow position:
               
chr10:26631510-26631355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
314-536
               

               
Cow position:
               
chr10:33116849-33117070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
314-570
               

               
Cow position:
               
chr10:6543827-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
314-577
               

               
Cow position:
               
chr10:2538194-2537928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
314-671
               

               
Cow position:
               
chr10:6530289-6529942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
314-671
               

               
Cow position:
               
chr10:52046974-52046606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 216
               

               
Conread position:
               
314-673
               

               
Cow position:
               
chr10:20897392-20897044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
315-624
               

               
Cow position:
               
chr10:29339294-29339598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
168, 104
               

               
Conread position:
               
315-697
               

               
Cow position:
               
chr10:54477199-54476830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
316-539
               

               
Cow position:
               
chr10:8449605-8449374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
316-607
               

               
Cow position:
               
chr10:47651401-47651106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
316-640
               

               
Cow position:
               
chr10:6665457-6665772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
262, 98
               

               
Conread position:
               
316-671
               

               
Cow position:
               
chr10:28670718-28671079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
316-673
               

               
Cow position:
               
chr10:24132723-24133079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
316-674
               

               
Cow position:
               
chr10:15871772-15872123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
316-687
               

               
Cow position:
               
chr10:3999011-3998632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
317-670
               

               
Cow position:
               
chr10:30440946-30441302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
112, 139
               

               
Conread position:
               
317-673
               

               
Cow position:
               
chr10:59151764-59152122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
318-670
               

               
Cow position:
               
chr10:10043008-10043350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 95
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr10:28104980-28105331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 121
               

               
Conread position:
               
320-504
               

               
Cow position:
               
chr10:52827501-52827679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr10:973230-973048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr10:54819362-54819170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
320-531
               

               
Cow position:
               
chr10:6199119-6198901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
320-671
               

               
Cow position:
               
chr10:27828418-27828082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr10:17176129-17175775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
320-674
               

               
Cow position:
               
chr10:2849445-2849094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
321-514
               

               
Cow position:
               
chr10:15425145-15424954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
321-673
               

               
Cow position:
               
chr10:15462597-15462240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
321-673
               

               
Cow position:
               
chr10:24745215-24744869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
322-613
               

               
Cow position:
               
chr10:51942883-51942588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
322-629
               

               
Cow position:
               
chr10:59164013-59164311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 11
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr10:22633532-22633737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
323-594
               

               
Cow position:
               
chr10:28776444-28776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
323-621
               

               
Cow position:
               
chr10:37173353-37173660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
323-672
               

               
Cow position:
               
chr10:51696834-51696495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
324-474
               

               
Cow position:
               
chr10:5739185-5739335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 114
               

               
Conread position:
               
324-475
               

               
Cow position:
               
chr10:31400267-31400112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
324-600
               

               
Cow position:
               
chr10:58612548-58612807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
325-602
               

               
Cow position:
               
chr10:68829192-68829472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
325-673
               

               
Cow position:
               
chr10:9083393-9083040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
327-645
               

               
Cow position:
               
chr10:51861988-51862299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
327-663
               

               
Cow position:
               
chr10:31779178-31779517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr10:29279536-29279187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
327-673
               

               
Cow position:
               
chr10:12315237-12314910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
327-673
               

               
Cow position:
               
chr10:32584002-32583657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
327-684
               

               
Cow position:
               
chr10:69559014-69558657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
151, 173
               

               
Conread position:
               
328-480
               

               
Cow position:
               
chr10:48898755-48898602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr10:37768392-37768207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
328-535
               

               
Cow position:
               
chr10:12100454-12100669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
328-556
               

               
Cow position:
               
chr10:58935080-58935311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
328-565
               

               
Cow position:
               
chr10:42451167-42451392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
328-670
               

               
Cow position:
               
chr10:37668067-37668416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr10:9341646-9341996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
328-673
               

               
Cow position:
               
chr10:52113584-52113924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
329-482
               

               
Cow position:
               
chr10:29349702-29349547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 137
               

               
Conread position:
               
329-600
               

               
Cow position:
               
chr10:50134716-50134996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
330-551
               

               
Cow position:
               
chr10:69216450-69216236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
330-673
               

               
Cow position:
               
chr10:49045926-49045585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
331-588
               

               
Cow position:
               
chr10:46184826-46184572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
331-644
               

               
Cow position:
               
chr10:38513261-38512944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
331-673
               

               
Cow position:
               
chr10:1749671-1749316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 83
               

               
Conread position:
               
332-672
               

               
Cow position:
               
chr10:65423819-65424169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
336-630
               

               
Cow position:
               
chr10:55930279-55929981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
336-673
               

               
Cow position:
               
chr10:13390966-13391312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
336-673
               

               
Cow position:
               
chr10:36896486-36896146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 137
               

               
Conread position:
               
337-466
               

               
Cow position:
               
chr10:34700711-34700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
337-502
               

               
Cow position:
               
chr10:17293351-17293522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
337-510
               

               
Cow position:
               
chr10:517363-517195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
337-605
               

               
Cow position:
               
chr10:22433830-22434114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
337-630
               

               
Cow position:
               
chr10:3362707-3362403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 196
               

               
Conread position:
               
337-637
               

               
Cow position:
               
chr10:33732792-33733092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
337-666
               

               
Cow position:
               
chr10:22321603-22321265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr10:11221783-11221451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr10:24763563-24763220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
337-674
               

               
Cow position:
               
chr10:45770124-45769780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
337-674
               

               
Cow position:
               
chr10:53357976-53357636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 50
               

               
Conread position:
               
337-675
               

               
Cow position:
               
chr10:22527821-22528162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
337-723
               

               
Cow position:
               
chr10:20997207-20997585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
338-672
               

               
Cow position:
               
chr10:23936556-23936225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
338-673
               

               
Cow position:
               
chr10:41941486-41941839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
339-535
               

               
Cow position:
               
chr10:533610-533409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
339-671
               

               
Cow position:
               
chr10:8923358-8923017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
340-641
               

               
Cow position:
               
chr10:46492917-46493230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
340-645
               

               
Cow position:
               
chr10:47412029-47412339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
343-605
               

               
Cow position:
               
chr10:24781263-24780993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
344-492
               

               
Cow position:
               
chr10:48282478-48282632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
347-673
               

               
Cow position:
               
chr10:8412982-8413309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
347-673
               

               
Cow position:
               
chr10:38725725-38725401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
349-466
               

               
Cow position:
               
chr10:24151822-24151937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr10:42892905-42893157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
353-650
               

               
Cow position:
               
chr10:10964052-10963751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
354-605
               

               
Cow position:
               
chr10:13617590-13617835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
354-605
               

               
Cow position:
               
chr10:37645123-37644880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
354-668
               

               
Cow position:
               
chr10:29588776-29589095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
354-673
               

               
Cow position:
               
chr10:21462306-21461982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
354-687
               

               
Cow position:
               
chr10:35887333-35887679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 182
               

               
Conread position:
               
357-578
               

               
Cow position:
               
chr10:47725007-47724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr10:41254513-41254750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
357-613
               

               
Cow position:
               
chr10:24307863-24308115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
357-673
               

               
Cow position:
               
chr10:9444962-9445272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
170, 15
               

               
Conread position:
               
357-673
               

               
Cow position:
               
chr10:51314067-51313731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
363-674
               

               
Cow position:
               
chr10:24548304-24547998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
364-672
               

               
Cow position:
               
chr10:35767036-35767336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
365-624
               

               
Cow position:
               
chr10:39303794-39304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr10:747520-747276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
368-671
               

               
Cow position:
               
chr10:12919307-12919598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
368-675
               

               
Cow position:
               
chr10:64876569-64876256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
373-675
               

               
Cow position:
               
chr10:29360963-29360647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
374-673
               

               
Cow position:
               
chr10:33891040-33891346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
375-624
               

               
Cow position:
               
chr10:45679060-45678803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
380-673
               

               
Cow position:
               
chr10:14098295-14098579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
381-660
               

               
Cow position:
               
chr10:32029796-32030070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
387-676
               

               
Cow position:
               
chr10:35857031-35857316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
394-674
               

               
Cow position:
               
chr10:1088053-1087759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
398-584
               

               
Cow position:
               
chr10:35856337-35856523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
399-651
               

               
Cow position:
               
chr10:25882430-25882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
399-673
               

               
Cow position:
               
chr10:6173376-6173101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
401-672
               

               
Cow position:
               
chr10:21037321-21037048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
402-673
               

               
Cow position:
               
chr10:17584021-17584288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
402-673
               

               
Cow position:
               
chr10:69567864-69567595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
404-687
               

               
Cow position:
               
chr10:33867385-33867653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
407-675
               

               
Cow position:
               
chr10:47165876-47165617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
412-672
               

               
Cow position:
               
chr10:19094649-19094390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
415-659
               

               
Cow position:
               
chr10:6986447-6986204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
415-675
               

               
Cow position:
               
chr10:55097697-55097942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
415-676
               

               
Cow position:
               
chr10:5607646-5607382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
417-674
               

               
Cow position:
               
chr10:20399199-20398939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
423-673
               

               
Cow position:
               
chr10:37528610-37528864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
424-605
               

               
Cow position:
               
chr10:3985419-3985239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
425-673
               

               
Cow position:
               
chr10:48388281-48388530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
434-671
               

               
Cow position:
               
chr10:24971629-24971856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
434-673
               

               
Cow position:
               
chr10:14975813-14976051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
434-673
               

               
Cow position:
               
chr10:20735683-20735449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
434-674
               

               
Cow position:
               
chr10:31266351-31266588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
436-672
               

               
Cow position:
               
chr10:17983163-17982925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
436-672
               

               
Cow position:
               
chr10:20505525-20505282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
436-673
               

               
Cow position:
               
chr10:25045709-25045941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
438-671
               

               
Cow position:
               
chr10:50200689-50200456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
439-687
               

               
Cow position:
               
chr10:5113552-5113313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
440-673
               

               
Cow position:
               
chr10:20447072-20446841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
446-606
               

               
Cow position:
               
chr10:1201906-1201739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
446-673
               

               
Cow position:
               
chr10:24871860-24871630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
449-667
               

               
Cow position:
               
chr10:1719558-1719780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
449-673
               

               
Cow position:
               
chr10:35026446-35026221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
450-674
               

               
Cow position:
               
chr10:888890-888666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
461-673
               

               
Cow position:
               
chr10:8077189-8077410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
466-634
               

               
Cow position:
               
chr10:32174681-32174508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
471-675
               

               
Cow position:
               
chr10:48377694-48377907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
485-673
               

               
Cow position:
               
chr10:8923868-8923676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
485-675
               

               
Cow position:
               
chr10:57736232-57736425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
498-671
               

               
Cow position:
               
chr10:14639446-14639612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.