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Cow genome map

           
Conread name:
           
LyN1-MLN01F010092
        

               
Conread position:
               
160-588
               

               
Cow position:
               
chr15:4179131-4178695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
203-602
               

               
Cow position:
               
chr15:20290208-20289814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
219-413
               

               
Cow position:
               
chr15:44089298-44089102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 138
               

               
Conread position:
               
227-675
               

               
Cow position:
               
chr15:15041553-15041108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
67, 131
               

               
Conread position:
               
229-517
               

               
Cow position:
               
chr15:41056332-41056037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
233-385
               

               
Cow position:
               
chr15:47920266-47920117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
233-574
               

               
Cow position:
               
chr15:1857608-1857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
182, 20
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr15:13513414-13513551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr15:41475946-41475749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
234-433
               

               
Cow position:
               
chr15:15992760-15992563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr15:17371421-17371629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
234-456
               

               
Cow position:
               
chr15:19002402-19002170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr15:7751032-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
234-477
               

               
Cow position:
               
chr15:47773599-47773364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
234-528
               

               
Cow position:
               
chr15:50552651-50552351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr15:20314365-20314676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr15:40379093-40379404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
234-572
               

               
Cow position:
               
chr15:10231860-10231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
234-598
               

               
Cow position:
               
chr15:16261211-16261566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
234-625
               

               
Cow position:
               
chr15:32324323-32323929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
234-626
               

               
Cow position:
               
chr15:38837627-38838027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
234-663
               

               
Cow position:
               
chr15:20391394-20390964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
234-665
               

               
Cow position:
               
chr15:20081656-20082076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
234-667
               

               
Cow position:
               
chr15:10088202-10088632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
234-672
               

               
Cow position:
               
chr15:10246112-10245684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr15:30047671-30047212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
234-673
               

               
Cow position:
               
chr15:30981836-30982240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 22
               

               
Conread position:
               
234-675
               

               
Cow position:
               
chr15:31857472-31857918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
234-675
               

               
Cow position:
               
chr15:43827890-43827446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
234-675
               

               
Cow position:
               
chr15:48851610-48851171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr15:27975992-27975815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr15:17621437-17621259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
235-457
               

               
Cow position:
               
chr15:39474052-39473828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
235-475
               

               
Cow position:
               
chr15:9978987-9979225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
235-479
               

               
Cow position:
               
chr15:26851340-26851098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
235-565
               

               
Cow position:
               
chr15:30471097-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 208
               

               
Conread position:
               
235-619
               

               
Cow position:
               
chr15:16657352-16657762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
235-673
               

               
Cow position:
               
chr15:17233069-17233518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 207
               

               
Conread position:
               
235-699
               

               
Cow position:
               
chr15:22938884-22938426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 189
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr15:13432367-13432607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
236-501
               

               
Cow position:
               
chr15:14281419-14281703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 213
               

               
Conread position:
               
236-579
               

               
Cow position:
               
chr15:43674062-43673714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
236-611
               

               
Cow position:
               
chr15:23572804-23572413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
236-659
               

               
Cow position:
               
chr15:47844203-47843797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
236-672
               

               
Cow position:
               
chr15:16928206-16927759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
236-672
               

               
Cow position:
               
chr15:17100820-17100391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 61
               

               
Conread position:
               
236-673
               

               
Cow position:
               
chr15:22532136-22532565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
236-687
               

               
Cow position:
               
chr15:22939440-22938995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
237-385
               

               
Cow position:
               
chr15:14969404-14969546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
237-387
               

               
Cow position:
               
chr15:20906144-20905997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
237-423
               

               
Cow position:
               
chr15:38420669-38420481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
237-456
               

               
Cow position:
               
chr15:44671455-44671229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
237-477
               

               
Cow position:
               
chr15:42380814-42381055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
237-504
               

               
Cow position:
               
chr15:49491537-49491794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
191, 32
               

               
Conread position:
               
237-522
               

               
Cow position:
               
chr15:36793606-36793314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
237-614
               

               
Cow position:
               
chr15:275529-275912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
237-673
               

               
Cow position:
               
chr15:14870640-14871070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 60
               

               
Conread position:
               
237-673
               

               
Cow position:
               
chr15:19771022-19771448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
237-673
               

               
Cow position:
               
chr15:29026998-29026554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 117
               

               
Conread position:
               
237-673
               

               
Cow position:
               
chr15:36435088-36435534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
237-675
               

               
Cow position:
               
chr15:6905424-6905868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 48
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr15:1500716-1500858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr15:1508242-1508384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr15:2378329-2378471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
238-408
               

               
Cow position:
               
chr15:848534-848699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
238-417
               

               
Cow position:
               
chr15:17124584-17124403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
238-417
               

               
Cow position:
               
chr15:40562797-40562617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
238-422
               

               
Cow position:
               
chr15:12357494-12357688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
238-426
               

               
Cow position:
               
chr15:21710222-21710033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chr15:44119582-44119389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
238-444
               

               
Cow position:
               
chr15:3591288-3591484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
238-468
               

               
Cow position:
               
chr15:38652716-38652483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
238-468
               

               
Cow position:
               
chr15:49131944-49132176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr15:31495331-31495103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
238-504
               

               
Cow position:
               
chr15:15177204-15177469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
238-513
               

               
Cow position:
               
chr15:42888948-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
238-535
               

               
Cow position:
               
chr15:33693486-33693177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
238-572
               

               
Cow position:
               
chr15:2380251-2380583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
237, 99
               

               
Conread position:
               
238-576
               

               
Cow position:
               
chr15:662577-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
238-586
               

               
Cow position:
               
chr15:286358-286719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 273
               

               
Conread position:
               
238-594
               

               
Cow position:
               
chr15:24616454-24616822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
238-663
               

               
Cow position:
               
chr15:4919184-4918738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
238-672
               

               
Cow position:
               
chr15:47990879-47990439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:1301033-1301464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:17084092-17084536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:20534566-20534125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:25667338-25666899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:35839210-35838766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr15:50957923-50957471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
238-674
               

               
Cow position:
               
chr15:6227289-6226873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
238-675
               

               
Cow position:
               
chr15:45478885-45479333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
238-676
               

               
Cow position:
               
chr15:21832558-21832097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
238-723
               

               
Cow position:
               
chr15:19402891-19403350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr15:41049569-41049382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
239-433
               

               
Cow position:
               
chr15:51211184-51211371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
176, 46
               

               
Conread position:
               
239-460
               

               
Cow position:
               
chr15:22444100-22443878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 177
               

               
Conread position:
               
239-461
               

               
Cow position:
               
chr15:11909060-11908840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 142
               

               
Conread position:
               
239-467
               

               
Cow position:
               
chr15:53028249-53028480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
239-479
               

               
Cow position:
               
chr15:36388186-36388418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr15:20856592-20856346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
239-513
               

               
Cow position:
               
chr15:4076218-4076488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
189, 68
               

               
Conread position:
               
239-539
               

               
Cow position:
               
chr15:6233128-6232826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 95
               

               
Conread position:
               
239-574
               

               
Cow position:
               
chr15:5409007-5408678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
242, 81
               

               
Conread position:
               
239-584
               

               
Cow position:
               
chr15:5717606-5717949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 68
               

               
Conread position:
               
239-590
               

               
Cow position:
               
chr15:16017920-16018279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
239-637
               

               
Cow position:
               
chr15:44658253-44658648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 85
               

               
Conread position:
               
239-659
               

               
Cow position:
               
chr15:27900618-27900194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
239-663
               

               
Cow position:
               
chr15:50341005-50341429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
239-670
               

               
Cow position:
               
chr15:28924875-28924445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr15:795130-794691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr15:36391558-36391994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 204
               

               
Conread position:
               
239-671
               

               
Cow position:
               
chr15:44051594-44051174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 94
               

               
Conread position:
               
239-672
               

               
Cow position:
               
chr15:4138023-4138460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
239-672
               

               
Cow position:
               
chr15:36621288-36621741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr15:3700397-3699958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
239-673
               

               
Cow position:
               
chr15:29810013-29810433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 10
               

               
Conread position:
               
239-674
               

               
Cow position:
               
chr15:6969872-6970311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
239-674
               

               
Cow position:
               
chr15:21941961-21941521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
239-674
               

               
Cow position:
               
chr15:39405629-39406060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 100
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:20472657-20472220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:32980147-32979708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:33284763-33285208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:43031139-43030695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:43914211-43913758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
239-675
               

               
Cow position:
               
chr15:51427939-51427497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
239-677
               

               
Cow position:
               
chr15:225916-225474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
240-368
               

               
Cow position:
               
chr15:16492342-16492471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
240-398
               

               
Cow position:
               
chr15:11630212-11630056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
240-401
               

               
Cow position:
               
chr15:10199222-10199378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr15:40844733-40844567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
240-409
               

               
Cow position:
               
chr15:840259-840091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
240-410
               

               
Cow position:
               
chr15:26849644-26849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr15:46059244-46059422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
240-415
               

               
Cow position:
               
chr15:33897710-33897887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr15:41321064-41320882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr15:52791828-52792008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr15:4500586-4500777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
240-427
               

               
Cow position:
               
chr15:42190327-42190520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
240-429
               

               
Cow position:
               
chr15:28099000-28099192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
240-430
               

               
Cow position:
               
chr15:43715218-43715408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
165, 77
               

               
Conread position:
               
240-456
               

               
Cow position:
               
chr15:7479111-7478890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
240-460
               

               
Cow position:
               
chr15:26529784-26530000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
240-461
               

               
Cow position:
               
chr15:4248036-4248259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
176, 184
               

               
Conread position:
               
240-465
               

               
Cow position:
               
chr15:2931683-2931451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
240-465
               

               
Cow position:
               
chr15:6037558-6037340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 45
               

               
Conread position:
               
240-473
               

               
Cow position:
               
chr15:50332863-50333105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
240-476
               

               
Cow position:
               
chr15:40835003-40835239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
171, 82
               

               
Conread position:
               
240-486
               

               
Cow position:
               
chr15:15154188-15154435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
240-505
               

               
Cow position:
               
chr15:3695525-3695790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 69
               

               
Conread position:
               
240-505
               

               
Cow position:
               
chr15:38827427-38827169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
240-506
               

               
Cow position:
               
chr15:4694639-4694902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr15:25571923-25571648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
240-520
               

               
Cow position:
               
chr15:41528078-41527806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr15:25349862-25350143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
169, 70
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr15:43114831-43114543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
240-535
               

               
Cow position:
               
chr15:35425904-35425628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
221, 70
               

               
Conread position:
               
240-539
               

               
Cow position:
               
chr15:28047873-28047565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr15:19950374-19950664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
240, 49
               

               
Conread position:
               
240-557
               

               
Cow position:
               
chr15:29686451-29686760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
240-559
               

               
Cow position:
               
chr15:33178538-33178211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
240-572
               

               
Cow position:
               
chr15:49273850-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 69
               

               
Conread position:
               
240-574
               

               
Cow position:
               
chr15:36353554-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
240-589
               

               
Cow position:
               
chr15:1502801-1503147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
240, 94
               

               
Conread position:
               
240-597
               

               
Cow position:
               
chr15:9648801-9648455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
240-601
               

               
Cow position:
               
chr15:4295648-4296020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
240-631
               

               
Cow position:
               
chr15:36259708-36259320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
240-634
               

               
Cow position:
               
chr15:49230425-49230056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
357, 79
               

               
Conread position:
               
240-640
               

               
Cow position:
               
chr15:2141433-2141004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
240-640
               

               
Cow position:
               
chr15:21822039-21821629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
240-650
               

               
Cow position:
               
chr15:26919381-26918972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 46
               

               
Conread position:
               
240-650
               

               
Cow position:
               
chr15:50350731-50351118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
240-667
               

               
Cow position:
               
chr15:11996140-11995707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
240-669
               

               
Cow position:
               
chr15:1083482-1083055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
240-670
               

               
Cow position:
               
chr15:20370563-20370142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr15:21893667-21894104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr15:27247411-27247835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
240-671
               

               
Cow position:
               
chr15:46563589-46563162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 80
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr15:16112282-16112728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr15:27973318-27972892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
240-672
               

               
Cow position:
               
chr15:49922023-49922463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 93
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:7429854-7430305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 254
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:14020385-14020795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:14505334-14505750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 9
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:17870404-17869971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 208
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:20459423-20458976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 293
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:22553653-22553200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 164
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:25208871-25208441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 197
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:33624859-33625276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:37381517-37381955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:39599337-39599764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
240-673
               

               
Cow position:
               
chr15:50322499-50322919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 46
               

               
Conread position:
               
240-674
               

               
Cow position:
               
chr15:30001584-30002015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
240-675
               

               
Cow position:
               
chr15:20487313-20486891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
240-675
               

               
Cow position:
               
chr15:51822038-51822468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
240-676
               

               
Cow position:
               
chr15:39598132-39598565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
240-677
               

               
Cow position:
               
chr15:30986398-30985953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
241-373
               

               
Cow position:
               
chr15:51558293-51558423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 73
               

               
Conread position:
               
241-387
               

               
Cow position:
               
chr15:53006046-53005904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
241-392
               

               
Cow position:
               
chr15:20566806-20566955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr15:21520031-21520221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
241-422
               

               
Cow position:
               
chr15:16230118-16230293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
241-467
               

               
Cow position:
               
chr15:21903518-21903293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
241-492
               

               
Cow position:
               
chr15:19554037-19553780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 248
               

               
Conread position:
               
241-521
               

               
Cow position:
               
chr15:10442622-10442332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 184
               

               
Conread position:
               
241-539
               

               
Cow position:
               
chr15:23780182-23779882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
241-574
               

               
Cow position:
               
chr15:4418513-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 180
               

               
Conread position:
               
241-586
               

               
Cow position:
               
chr15:22930462-22930099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
241-592
               

               
Cow position:
               
chr15:53037073-53036722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
241-605
               

               
Cow position:
               
chr15:36887728-36888083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
241-652
               

               
Cow position:
               
chr15:1722952-1722548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
241-663
               

               
Cow position:
               
chr15:12722973-12723400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 186
               

               
Conread position:
               
241-672
               

               
Cow position:
               
chr15:37644878-37645294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
86, 174
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr15:12304529-12304965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr15:13846676-13846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
298, 68
               

               
Conread position:
               
241-673
               

               
Cow position:
               
chr15:22530970-22531385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
243, 77
               

               
Conread position:
               
241-678
               

               
Cow position:
               
chr15:17762796-17763229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
242-380
               

               
Cow position:
               
chr15:49959427-49959559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
242-412
               

               
Cow position:
               
chr15:8331307-8331142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
242-443
               

               
Cow position:
               
chr15:34223757-34223959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
242-447
               

               
Cow position:
               
chr15:12045650-12045439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
242-457
               

               
Cow position:
               
chr15:48095246-48095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 199
               

               
Conread position:
               
242-479
               

               
Cow position:
               
chr15:52316950-52317184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
242-517
               

               
Cow position:
               
chr15:14987885-14988157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
242-528
               

               
Cow position:
               
chr15:36846297-36845996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 186
               

               
Conread position:
               
242-539
               

               
Cow position:
               
chr15:31929008-31928709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
242-588
               

               
Cow position:
               
chr15:28823922-28823579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
176, 34
               

               
Conread position:
               
242-672
               

               
Cow position:
               
chr15:26912178-26911756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
242-673
               

               
Cow position:
               
chr15:40957468-40957903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
242-675
               

               
Cow position:
               
chr15:35641901-35642346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 133
               

               
Conread position:
               
242-702
               

               
Cow position:
               
chr15:8665717-8665228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
243-436
               

               
Cow position:
               
chr15:8997181-8997382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
243-446
               

               
Cow position:
               
chr15:8641999-8642213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 201
               

               
Conread position:
               
243-453
               

               
Cow position:
               
chr15:38820593-38820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
243-667
               

               
Cow position:
               
chr15:16603721-16604140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 17
               

               
Conread position:
               
243-673
               

               
Cow position:
               
chr15:26158708-26158293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 196
               

               
Conread position:
               
244-637
               

               
Cow position:
               
chr15:33642984-33643374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
245-474
               

               
Cow position:
               
chr15:27063624-27063397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr15:31637188-31637425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
71, 185
               

               
Conread position:
               
245-577
               

               
Cow position:
               
chr15:31042775-31043096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
245-672
               

               
Cow position:
               
chr15:41225679-41225240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 202
               

               
Conread position:
               
245-673
               

               
Cow position:
               
chr15:21803772-21803333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
245-674
               

               
Cow position:
               
chr15:24994618-24994200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
246-425
               

               
Cow position:
               
chr15:12913605-12913424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
246-462
               

               
Cow position:
               
chr15:26442108-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
246-512
               

               
Cow position:
               
chr15:6427752-6427468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
246-633
               

               
Cow position:
               
chr15:608037-608434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
246-640
               

               
Cow position:
               
chr15:16667604-16667208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
246-673
               

               
Cow position:
               
chr15:11658689-11658241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
246-674
               

               
Cow position:
               
chr15:26896805-26896386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
246-675
               

               
Cow position:
               
chr15:24967695-24968113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 62
               

               
Conread position:
               
249-466
               

               
Cow position:
               
chr15:10880984-10880768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr15:244679-245055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
249-671
               

               
Cow position:
               
chr15:30316663-30316267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
163, 30
               

               
Conread position:
               
249-672
               

               
Cow position:
               
chr15:1330212-1329776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 280
               

               
Conread position:
               
250-409
               

               
Cow position:
               
chr15:5710310-5710459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
250-409
               

               
Cow position:
               
chr15:18704035-18703878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
250-465
               

               
Cow position:
               
chr15:49784383-49784170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
250-478
               

               
Cow position:
               
chr15:20950150-20950382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
250-539
               

               
Cow position:
               
chr15:5158269-5158564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 177
               

               
Conread position:
               
250-601
               

               
Cow position:
               
chr15:18671551-18671192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 26
               

               
Conread position:
               
251-621
               

               
Cow position:
               
chr15:20422866-20422505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
251-622
               

               
Cow position:
               
chr15:85347-84974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
251-670
               

               
Cow position:
               
chr15:45527-45094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
252-686
               

               
Cow position:
               
chr15:5235091-5234667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 32
               

               
Conread position:
               
253-411
               

               
Cow position:
               
chr15:49483527-49483687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
253-422
               

               
Cow position:
               
chr15:37719687-37719521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
253-424
               

               
Cow position:
               
chr15:38386487-38386661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
253-469
               

               
Cow position:
               
chr15:15025068-15025286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
253-514
               

               
Cow position:
               
chr15:13783067-13782803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
253-592
               

               
Cow position:
               
chr15:34896662-34897010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
253-673
               

               
Cow position:
               
chr15:26079445-26079047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
164, 81
               

               
Conread position:
               
253-674
               

               
Cow position:
               
chr15:21420848-21421267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
253-674
               

               
Cow position:
               
chr15:24797902-24797488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 68
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr15:9465576-9465867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 272
               

               
Conread position:
               
254-579
               

               
Cow position:
               
chr15:915949-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
254-597
               

               
Cow position:
               
chr15:11559450-11559105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
254-630
               

               
Cow position:
               
chr15:25906820-25907194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 72
               

               
Conread position:
               
254-650
               

               
Cow position:
               
chr15:5420980-5420583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
254-673
               

               
Cow position:
               
chr15:4485050-4485468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
255-456
               

               
Cow position:
               
chr15:7956176-7955966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
256-673
               

               
Cow position:
               
chr15:39490757-39490327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
257-529
               

               
Cow position:
               
chr15:20723077-20722809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
257-539
               

               
Cow position:
               
chr15:14888732-14888451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 52
               

               
Conread position:
               
257-591
               

               
Cow position:
               
chr15:8353946-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 178
               

               
Conread position:
               
257-644
               

               
Cow position:
               
chr15:23696997-23696622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
257-651
               

               
Cow position:
               
chr15:9622085-9622494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
257-672
               

               
Cow position:
               
chr15:17196050-17196468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 170
               

               
Conread position:
               
258-415
               

               
Cow position:
               
chr15:16644882-16644723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
258-422
               

               
Cow position:
               
chr15:5691008-5691169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
258-430
               

               
Cow position:
               
chr15:36422524-36422693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
258-446
               

               
Cow position:
               
chr15:10049408-10049217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr15:10608403-10608053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
258-605
               

               
Cow position:
               
chr15:23275439-23275794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 186
               

               
Conread position:
               
259-663
               

               
Cow position:
               
chr15:53163927-53164336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
259-671
               

               
Cow position:
               
chr15:52482922-52482505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
259-674
               

               
Cow position:
               
chr15:2953226-2952804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 75
               

               
Conread position:
               
260-550
               

               
Cow position:
               
chr15:34284502-34284212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
261-473
               

               
Cow position:
               
chr15:22984477-22984697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
261-571
               

               
Cow position:
               
chr15:24982270-24981967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
261-633
               

               
Cow position:
               
chr15:1804424-1804044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
261-671
               

               
Cow position:
               
chr15:38883051-38883478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
261-676
               

               
Cow position:
               
chr15:26903102-26903522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 49
               

               
Conread position:
               
262-539
               

               
Cow position:
               
chr15:38935314-38935597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
263-675
               

               
Cow position:
               
chr15:26404199-26404595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
264-585
               

               
Cow position:
               
chr15:24031109-24031426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
265-478
               

               
Cow position:
               
chr15:52432251-52432473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 210
               

               
Conread position:
               
265-670
               

               
Cow position:
               
chr15:38806592-38806174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 173
               

               
Conread position:
               
267-604
               

               
Cow position:
               
chr15:11560603-11560256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 259
               

               
Conread position:
               
272-605
               

               
Cow position:
               
chr15:39316923-39316575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
272-667
               

               
Cow position:
               
chr15:31948923-31949318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
274-538
               

               
Cow position:
               
chr15:12358957-12359224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 6
               

               
Conread position:
               
279-615
               

               
Cow position:
               
chr15:22871544-22871876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 7
               

               
Conread position:
               
284-521
               

               
Cow position:
               
chr15:5044544-5044311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
286-465
               

               
Cow position:
               
chr15:10431748-10431928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
287-600
               

               
Cow position:
               
chr15:12655983-12655657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
288-505
               

               
Cow position:
               
chr15:44280038-44280256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
291-652
               

               
Cow position:
               
chr15:17353706-17353347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
294-597
               

               
Cow position:
               
chr15:10737797-10737497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
299-673
               

               
Cow position:
               
chr15:13554302-13554665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
302-673
               

               
Cow position:
               
chr15:20482900-20482513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
305-509
               

               
Cow position:
               
chr15:32977894-32977685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 131
               

               
Conread position:
               
306-663
               

               
Cow position:
               
chr15:42789195-42788840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
307-482
               

               
Cow position:
               
chr15:41582836-41583010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
307-675
               

               
Cow position:
               
chr15:32287782-32287432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
233, 13
               

               
Conread position:
               
308-473
               

               
Cow position:
               
chr15:27016290-27016127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
308-670
               

               
Cow position:
               
chr15:26421645-26421276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
308-671
               

               
Cow position:
               
chr15:29604743-29604395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
310-457
               

               
Cow position:
               
chr15:2389653-2389804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr15:25650451-25650289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
310-539
               

               
Cow position:
               
chr15:21166467-21166227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
310-594
               

               
Cow position:
               
chr15:5726282-5726573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
310-599
               

               
Cow position:
               
chr15:47592704-47592406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
148, 23
               

               
Conread position:
               
310-630
               

               
Cow position:
               
chr15:7535696-7535387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
310-671
               

               
Cow position:
               
chr15:50302145-50302508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
310-673
               

               
Cow position:
               
chr15:39621297-39621662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr15:16583731-16583386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
310-675
               

               
Cow position:
               
chr15:33303283-33303659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
311-467
               

               
Cow position:
               
chr15:14261297-14261142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
311-475
               

               
Cow position:
               
chr15:40594547-40594379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
311-515
               

               
Cow position:
               
chr15:14176539-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
311-549
               

               
Cow position:
               
chr15:5929857-5930089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
311-558
               

               
Cow position:
               
chr15:35441118-35440868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
311-591
               

               
Cow position:
               
chr15:29330966-29331249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
311-684
               

               
Cow position:
               
chr15:36782369-36781997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
312-672
               

               
Cow position:
               
chr15:46868754-46868390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
313-459
               

               
Cow position:
               
chr15:18776789-18776642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr15:50660583-50660742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr15:52878239-52878398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
313-492
               

               
Cow position:
               
chr15:31024955-31025134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
313-538
               

               
Cow position:
               
chr15:10563541-10563316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
313-675
               

               
Cow position:
               
chr15:33306072-33306433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
314-458
               

               
Cow position:
               
chr15:39520131-39520276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
314-507
               

               
Cow position:
               
chr15:6272924-6272730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
314-574
               

               
Cow position:
               
chr15:17337325-17337587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr15:35205186-35204947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
317-673
               

               
Cow position:
               
chr15:35945496-35945866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
318-577
               

               
Cow position:
               
chr15:50088945-50089214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
320-671
               

               
Cow position:
               
chr15:16307390-16307738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 115
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr15:16543483-16543140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr15:22136659-22137006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
321-521
               

               
Cow position:
               
chr15:16908403-16908603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
322-583
               

               
Cow position:
               
chr15:12870893-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
322-671
               

               
Cow position:
               
chr15:21389192-21388842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 14
               

               
Conread position:
               
322-675
               

               
Cow position:
               
chr15:362997-363344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr15:40415670-40415484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
323-522
               

               
Cow position:
               
chr15:22442306-22442099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
323-539
               

               
Cow position:
               
chr15:9781443-9781653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
323-686
               

               
Cow position:
               
chr15:6530876-6530506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
324-504
               

               
Cow position:
               
chr15:44237389-44237573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 107
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr15:37284428-37284582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
328-472
               

               
Cow position:
               
chr15:23719507-23719363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
328-483
               

               
Cow position:
               
chr15:30794956-30795111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
150, 104
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr15:19920357-19920175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
328-521
               

               
Cow position:
               
chr15:48711078-48710881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
328-672
               

               
Cow position:
               
chr15:33976719-33976370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
328-675
               

               
Cow position:
               
chr15:34207211-34206871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr15:41000093-40999734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
330-539
               

               
Cow position:
               
chr15:39326539-39326325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
331-534
               

               
Cow position:
               
chr15:52809601-52809400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
331-579
               

               
Cow position:
               
chr15:43599168-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 180
               

               
Conread position:
               
331-592
               

               
Cow position:
               
chr15:10660576-10660309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
334-672
               

               
Cow position:
               
chr15:47843269-47842935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
334-674
               

               
Cow position:
               
chr15:4093951-4093599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
336-673
               

               
Cow position:
               
chr15:23768273-23767941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
337-601
               

               
Cow position:
               
chr15:6905062-6905317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
337-670
               

               
Cow position:
               
chr15:10335742-10336076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
337-672
               

               
Cow position:
               
chr15:20351817-20352157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr15:45216824-45217144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
337-674
               

               
Cow position:
               
chr15:44640881-44641223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
343-674
               

               
Cow position:
               
chr15:35417634-35417296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
344-673
               

               
Cow position:
               
chr15:4534903-4535231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
344-675
               

               
Cow position:
               
chr15:24128023-24128346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
345-675
               

               
Cow position:
               
chr15:5729933-5730263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
346-673
               

               
Cow position:
               
chr15:5727649-5727962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
347-591
               

               
Cow position:
               
chr15:3726119-3726364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
347-672
               

               
Cow position:
               
chr15:16639772-16640107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr15:40343244-40343574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
349-672
               

               
Cow position:
               
chr15:23568130-23567803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
349-674
               

               
Cow position:
               
chr15:6657096-6657431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
350-670
               

               
Cow position:
               
chr15:41360952-41360641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
354-673
               

               
Cow position:
               
chr15:22713826-22713506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
355-673
               

               
Cow position:
               
chr15:49739031-49738723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
355-676
               

               
Cow position:
               
chr15:48486640-48486960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
359-669
               

               
Cow position:
               
chr15:13515373-13515692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
367-600
               

               
Cow position:
               
chr15:23114849-23115099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-673
               

               
Cow position:
               
chr15:18720329-18720638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
367-673
               

               
Cow position:
               
chr15:31283400-31283692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
368-671
               

               
Cow position:
               
chr15:15880942-15881257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
368-675
               

               
Cow position:
               
chr15:24128677-24128975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
370-675
               

               
Cow position:
               
chr15:5571611-5571310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
375-605
               

               
Cow position:
               
chr15:17859203-17858978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
379-673
               

               
Cow position:
               
chr15:27280898-27281188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
381-673
               

               
Cow position:
               
chr15:5632710-5632996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
390-631
               

               
Cow position:
               
chr15:38877266-38877021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
390-674
               

               
Cow position:
               
chr15:9871376-9871085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
400-590
               

               
Cow position:
               
chr15:19119563-19119359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
401-612
               

               
Cow position:
               
chr15:12441772-12441558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr15:8962059-8962326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
408-673
               

               
Cow position:
               
chr15:40009598-40009326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
414-673
               

               
Cow position:
               
chr15:15708049-15707796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
414-675
               

               
Cow position:
               
chr15:20725551-20725289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
417-640
               

               
Cow position:
               
chr15:4350535-4350309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
417-674
               

               
Cow position:
               
chr15:47105109-47105362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
423-663
               

               
Cow position:
               
chr15:10845790-10846036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 192
               

               
Conread position:
               
434-671
               

               
Cow position:
               
chr15:7750053-7749821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
436-637
               

               
Cow position:
               
chr15:34145068-34144867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
436-674
               

               
Cow position:
               
chr15:23927388-23927144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
439-579
               

               
Cow position:
               
chr15:13684179-13684033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
439-675
               

               
Cow position:
               
chr15:11363087-11362856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
440-662
               

               
Cow position:
               
chr15:53402901-53402685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
440-667
               

               
Cow position:
               
chr15:28126955-28126731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
440-673
               

               
Cow position:
               
chr15:52380378-52380615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
440-673
               

               
Cow position:
               
chr15:53680670-53680444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
456-673
               

               
Cow position:
               
chr15:41583015-41583234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
478-665
               

               
Cow position:
               
chr15:43765656-43765850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 108
               
Show alignments to all cow chromosomes.