Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 347-503 |
| Cow position: | chr14:38241613-38241456 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 347-507 |
| Cow position: | chr14:22026808-22026647 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 353-517 |
| Cow position: | chr14:8102705-8102540 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 353-517 |
| Cow position: | chr14:11474349-11474185 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-517 |
| Cow position: | chr14:32584057-32583895 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 353-518 |
| Cow position: | chr14:34906498-34906663 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr14:44293591-44293755 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 353-520 |
| Cow position: | chr14:42849629-42849460 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 353-539 |
| Cow position: | chr14:5379132-5379314 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 353-539 |
| Cow position: | chr14:12740076-12739892 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr14:11150943-11150758 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr14:12903307-12903491 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 68 |
| Conread position: | 353-540 |
| Cow position: | chr14:17690101-17690278 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 353-540 |
| Cow position: | chr14:20786357-20786540 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 353-540 |
| Cow position: | chr14:24980520-24980705 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 353-540 |
| Cow position: | chr14:27040413-27040228 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr14:28993375-28993195 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 353-540 |
| Cow position: | chr14:41081670-41081484 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 353-540 |
| Cow position: | chr14:46302878-46303063 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr14:48251481-48251298 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 353-542 |
| Cow position: | chr14:30476370-30476184 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 353-542 |
| Cow position: | chr14:45739351-45739165 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 353-542 |
| Cow position: | chr14:45848129-45848317 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 158 |
| Conread position: | 353-543 |
| Cow position: | chr14:13276053-13276239 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 353-544 |
| Cow position: | chr14:10310532-10310721 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-544 |
| Cow position: | chr14:21534108-21534294 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 353-544 |
| Cow position: | chr14:22689923-22689733 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 353-544 |
| Cow position: | chr14:33835036-33834847 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 353-544 |
| Cow position: | chr14:41212097-41211908 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 355-511 |
| Cow position: | chr14:44026841-44026684 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 356-513 |
| Cow position: | chr14:47593333-47593487 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 356-518 |
| Cow position: | chr14:7647090-7647253 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 356-540 |
| Cow position: | chr14:7475832-7476014 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-540 |
| Cow position: | chr14:13308706-13308889 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 356-540 |
| Cow position: | chr14:44692125-44692307 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-540 |
| Cow position: | chr14:49995569-49995388 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 356-540 |
| Cow position: | chr14:50069222-50069040 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 356-544 |
| Cow position: | chr14:193125-193311 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 358-518 |
| Cow position: | chr14:4992181-4992028 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 358-518 |
| Cow position: | chr14:37677359-37677521 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-514 |
| Cow position: | chr14:30663058-30662902 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 360-544 |
| Cow position: | chr14:39773937-39774118 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 361-516 |
| Cow position: | chr14:17771193-17771040 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 361-520 |
| Cow position: | chr14:25430631-25430792 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-544 |
| Cow position: | chr14:42259445-42259627 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 167, 47 |
| Conread position: | 361-544 |
| Cow position: | chr14:43561177-43561354 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 361-558 |
| Cow position: | chr14:24990298-24990100 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 362-537 |
| Cow position: | chr14:44772854-44772675 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 367-518 |
| Cow position: | chr14:37227183-37227331 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 368-540 |
| Cow position: | chr14:1802184-1802354 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 369-518 |
| Cow position: | chr14:47645415-47645564 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 386-542 |
| Cow position: | chr14:12859530-12859378 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 387-541 |
| Cow position: | chr14:40189901-40189748 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 394-540 |
| Cow position: | chr14:5492286-5492142 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 397-536 |
| Cow position: | chr14:41757176-41757038 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 124 |
Show alignments to all cow chromosomes.