Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 347-538 |
| Cow position: | chr15:7271312-7271499 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 351-540 |
| Cow position: | chr15:24569078-24568891 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 155 |
| Conread position: | 353-501 |
| Cow position: | chr15:7325418-7325270 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 353-512 |
| Cow position: | chr15:4787824-4787663 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-517 |
| Cow position: | chr15:4769481-4769648 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 353-517 |
| Cow position: | chr15:36356092-36355927 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-518 |
| Cow position: | chr15:4712884-4713049 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-518 |
| Cow position: | chr15:7319542-7319707 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr15:12417736-12417573 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 353-518 |
| Cow position: | chr15:15344130-15343966 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 353-518 |
| Cow position: | chr15:16787668-16787502 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-518 |
| Cow position: | chr15:18579699-18579864 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr15:19734822-19734657 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 353-518 |
| Cow position: | chr15:42939888-42940053 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 353-519 |
| Cow position: | chr15:42533027-42533194 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-538 |
| Cow position: | chr15:18661464-18661646 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 353-539 |
| Cow position: | chr15:9910125-9909941 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr15:561703-561888 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr15:2080308-2080492 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 353-540 |
| Cow position: | chr15:2899281-2899096 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr15:3721163-3720978 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 62, 156 |
| Conread position: | 353-540 |
| Cow position: | chr15:5197932-5198117 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 353-540 |
| Cow position: | chr15:6152667-6152482 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr15:7841296-7841481 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr15:44073422-44073607 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 161 |
| Conread position: | 353-541 |
| Cow position: | chr15:6758500-6758314 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-542 |
| Cow position: | chr15:41793353-41793166 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 353-544 |
| Cow position: | chr15:794033-794222 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 353-544 |
| Cow position: | chr15:1329135-1329314 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 353-544 |
| Cow position: | chr15:6945459-6945270 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 353-544 |
| Cow position: | chr15:10736543-10736733 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 353-544 |
| Cow position: | chr15:18019410-18019221 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 353-544 |
| Cow position: | chr15:40171396-40171208 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 353-544 |
| Cow position: | chr15:51910559-51910367 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 354-521 |
| Cow position: | chr15:25066087-25066254 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 356-507 |
| Cow position: | chr15:29811765-29811613 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 356-538 |
| Cow position: | chr15:36622682-36622511 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 356-542 |
| Cow position: | chr15:8753842-8754024 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 356-543 |
| Cow position: | chr15:1082417-1082602 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 356-543 |
| Cow position: | chr15:1129011-1128826 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 356-544 |
| Cow position: | chr15:21911317-21911131 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 161, 54 |
| Conread position: | 356-544 |
| Cow position: | chr15:26933024-26933208 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 357-540 |
| Cow position: | chr15:6550633-6550452 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 361-519 |
| Cow position: | chr15:16340519-16340359 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 361-542 |
| Cow position: | chr15:8001582-8001399 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 153 |
| Conread position: | 361-544 |
| Cow position: | chr15:28071451-28071274 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 150 |
| Conread position: | 361-544 |
| Cow position: | chr15:30726254-30726073 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 364-517 |
| Cow position: | chr15:16741045-16741200 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 364-540 |
| Cow position: | chr15:48556706-48556881 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 143 |
| Conread position: | 364-544 |
| Cow position: | chr15:30045393-30045573 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 368-522 |
| Cow position: | chr15:3791793-3791948 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 368-544 |
| Cow position: | chr15:40344259-40344084 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 41, 148 |
| Conread position: | 385-517 |
| Cow position: | chr15:24968756-24968622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 386-519 |
| Cow position: | chr15:11628412-11628545 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 389-544 |
| Cow position: | chr15:25908181-25908027 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 411-517 |
| Cow position: | chr15:40006507-40006614 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.