Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 347-540 |
| Cow position: | chr16:28468498-28468309 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 347-540 |
| Cow position: | chr16:37478236-37478047 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 347-542 |
| Cow position: | chr16:2724599-2724408 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 350-540 |
| Cow position: | chr16:43562770-43562582 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 353-515 |
| Cow position: | chr16:12736909-12737072 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 353-516 |
| Cow position: | chr16:54231719-54231555 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-517 |
| Cow position: | chr16:15187693-15187857 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr16:26666333-26666498 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 56, 162 |
| Conread position: | 353-519 |
| Cow position: | chr16:37058384-37058219 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 353-519 |
| Cow position: | chr16:41036397-41036232 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 353-539 |
| Cow position: | chr16:7467241-7467421 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 353-540 |
| Cow position: | chr16:839900-840084 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 353-540 |
| Cow position: | chr16:1563759-1563574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:1734368-1734553 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:3769382-3769194 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 156 |
| Conread position: | 353-540 |
| Cow position: | chr16:4426719-4426904 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:5350879-5350694 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:5435454-5435639 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:5488500-5488685 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-540 |
| Cow position: | chr16:12160654-12160470 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr16:14352055-14351870 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:15979749-15979564 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:25344608-25344793 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:39033716-39033531 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 156 |
| Conread position: | 353-540 |
| Cow position: | chr16:40293542-40293356 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 353-540 |
| Cow position: | chr16:43894633-43894447 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 353-540 |
| Cow position: | chr16:46101990-46101805 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:48411264-48411449 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr16:51640878-51641061 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 353-540 |
| Cow position: | chr16:52526860-52527045 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-541 |
| Cow position: | chr16:4722108-4722294 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 353-544 |
| Cow position: | chr16:237108-237295 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 353-544 |
| Cow position: | chr16:6380009-6379821 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 353-544 |
| Cow position: | chr16:11007334-11007530 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 353-544 |
| Cow position: | chr16:15495083-15495270 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 353-544 |
| Cow position: | chr16:31425687-31425876 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 159 |
| Conread position: | 353-544 |
| Cow position: | chr16:37670878-37670691 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 353-544 |
| Cow position: | chr16:54228658-54228469 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 6 |
| Conread position: | 353-545 |
| Cow position: | chr16:17142032-17142223 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 353-545 |
| Cow position: | chr16:47367615-47367803 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 353-546 |
| Cow position: | chr16:25444505-25444696 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-546 |
| Cow position: | chr16:42074269-42074073 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-547 |
| Cow position: | chr16:8813476-8813284 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-551 |
| Cow position: | chr16:23985942-23986137 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 354-516 |
| Cow position: | chr16:18948718-18948875 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 354-540 |
| Cow position: | chr16:11633214-11633030 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 354-540 |
| Cow position: | chr16:16624985-16625170 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 355-544 |
| Cow position: | chr16:19798064-19797874 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 355-544 |
| Cow position: | chr16:49516150-49515963 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 356-520 |
| Cow position: | chr16:7457350-7457190 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 356-522 |
| Cow position: | chr16:39615854-39616020 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 356-522 |
| Cow position: | chr16:42079718-42079555 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 148, 31 |
| Conread position: | 356-540 |
| Cow position: | chr16:10440871-10441052 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 356-540 |
| Cow position: | chr16:24240768-24240586 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 150 |
| Conread position: | 356-540 |
| Cow position: | chr16:29050277-29050459 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-542 |
| Cow position: | chr16:27013029-27013213 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 356-545 |
| Cow position: | chr16:51400922-51400738 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 24 |
| Conread position: | 358-493 |
| Cow position: | chr16:49230647-49230510 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 361-511 |
| Cow position: | chr16:42733648-42733498 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 361-517 |
| Cow position: | chr16:9417500-9417657 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 361-540 |
| Cow position: | chr16:37446067-37445890 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 361-549 |
| Cow position: | chr16:45798984-45799172 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 186 |
| Conread position: | 368-518 |
| Cow position: | chr16:46223867-46223717 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 368-540 |
| Cow position: | chr16:2480511-2480341 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 372-542 |
| Cow position: | chr16:42745836-42745668 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 386-544 |
| Cow position: | chr16:14029499-14029339 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 388-544 |
| Cow position: | chr16:20968223-20968069 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 118 |
| Conread position: | 392-544 |
| Cow position: | chr16:3632734-3632885 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 407-540 |
| Cow position: | chr16:45683371-45683501 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.