Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 353-502 |
| Cow position: | chr17:29950401-29950551 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-504 |
| Cow position: | chr17:138797-138943 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 353-514 |
| Cow position: | chr17:17221502-17221663 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 353-514 |
| Cow position: | chr17:18591610-18591760 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 353-517 |
| Cow position: | chr17:145017-144853 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 353-519 |
| Cow position: | chr17:18814344-18814512 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 353-522 |
| Cow position: | chr17:18471359-18471535 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 55, 166 |
| Conread position: | 353-537 |
| Cow position: | chr17:27978293-27978478 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 353-539 |
| Cow position: | chr17:2583581-2583760 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-539 |
| Cow position: | chr17:3197441-3197257 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr17:2201486-2201671 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr17:11083946-11083761 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr17:14243015-14243201 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 353-540 |
| Cow position: | chr17:15328470-15328655 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 353-540 |
| Cow position: | chr17:18099885-18099700 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr17:25739485-25739670 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-542 |
| Cow position: | chr17:17128194-17128380 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 353-544 |
| Cow position: | chr17:1672487-1672675 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 353-544 |
| Cow position: | chr17:1883433-1883621 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 353-544 |
| Cow position: | chr17:4211118-4211310 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-544 |
| Cow position: | chr17:8449900-8450089 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 353-544 |
| Cow position: | chr17:29156562-29156759 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-544 |
| Cow position: | chr17:33934633-33934437 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 353-544 |
| Cow position: | chr17:36790254-36790444 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 159 |
| Conread position: | 353-545 |
| Cow position: | chr17:38829070-38829261 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 356-508 |
| Cow position: | chr17:40810943-40811088 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 356-545 |
| Cow position: | chr17:2839214-2839397 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 357-502 |
| Cow position: | chr17:39629793-39629644 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 112 |
| Conread position: | 357-544 |
| Cow position: | chr17:19369634-19369819 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 357-544 |
| Cow position: | chr17:44482041-44482230 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 359-518 |
| Cow position: | chr17:20083235-20083074 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 361-518 |
| Cow position: | chr17:2698752-2698906 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 361-519 |
| Cow position: | chr17:7054066-7053907 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 361-543 |
| Cow position: | chr17:20209684-20209498 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 156 |
| Conread position: | 364-532 |
| Cow position: | chr17:1219752-1219584 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 364-544 |
| Cow position: | chr17:40801948-40802125 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 368-542 |
| Cow position: | chr17:41318967-41318794 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 369-518 |
| Cow position: | chr17:997971-997822 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 137 |
| Conread position: | 369-544 |
| Cow position: | chr17:23884598-23884430 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 372-504 |
| Cow position: | chr17:5748634-5748500 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 372-544 |
| Cow position: | chr17:3780858-3781029 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 373-551 |
| Cow position: | chr17:43227540-43227717 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 146 |
| Conread position: | 378-517 |
| Cow position: | chr17:38629339-38629482 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 382-544 |
| Cow position: | chr17:41014380-41014539 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-542 |
| Cow position: | chr17:32457234-32457079 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 94 |
| Conread position: | 392-544 |
| Cow position: | chr17:10843499-10843651 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-544 |
| Cow position: | chr17:34000129-33999996 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 433-544 |
| Cow position: | chr17:4107796-4107685 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 42 |
Show alignments to all cow chromosomes.