Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 351-515 |
| Cow position: | chr18:36187983-36187818 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 352-544 |
| Cow position: | chr18:16025247-16025054 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 57, 166 |
| Conread position: | 353-511 |
| Cow position: | chr18:43129500-43129654 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 353-517 |
| Cow position: | chr18:16094297-16094461 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-517 |
| Cow position: | chr18:29863192-29863028 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-517 |
| Cow position: | chr18:36512046-36512207 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 353-518 |
| Cow position: | chr18:5076770-5076607 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 353-518 |
| Cow position: | chr18:14419389-14419554 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-518 |
| Cow position: | chr18:23802435-23802600 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 353-518 |
| Cow position: | chr18:36776688-36776853 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr18:41837678-41837513 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr18:43430418-43430580 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 353-518 |
| Cow position: | chr18:54033120-54033285 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-519 |
| Cow position: | chr18:30035317-30035152 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 353-523 |
| Cow position: | chr18:39494200-39494368 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 353-540 |
| Cow position: | chr18:5536384-5536570 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 353-540 |
| Cow position: | chr18:6733553-6733369 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr18:14127874-14127690 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 353-540 |
| Cow position: | chr18:16173201-16173016 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 353-540 |
| Cow position: | chr18:23701391-23701206 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr18:26305685-26305869 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 353-540 |
| Cow position: | chr18:27990169-27990354 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr18:28968877-28968692 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 353-540 |
| Cow position: | chr18:37509374-37509559 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr18:38158130-38157945 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-544 |
| Cow position: | chr18:2853375-2853187 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 353-544 |
| Cow position: | chr18:33607643-33607835 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 152, 25 |
| Conread position: | 356-513 |
| Cow position: | chr18:36477196-36477349 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 356-517 |
| Cow position: | chr18:13508654-13508491 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 356-518 |
| Cow position: | chr18:33157951-33158113 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 356-538 |
| Cow position: | chr18:25354936-25355116 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-540 |
| Cow position: | chr18:29586197-29586015 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 356-544 |
| Cow position: | chr18:12269568-12269756 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 356-544 |
| Cow position: | chr18:36122447-36122257 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 356-546 |
| Cow position: | chr18:44261483-44261672 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 357-517 |
| Cow position: | chr18:32245921-32245746 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 357-540 |
| Cow position: | chr18:51485003-51485184 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 52, 149 |
| Conread position: | 358-542 |
| Cow position: | chr18:32210395-32210216 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 358-544 |
| Cow position: | chr18:14047786-14047968 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-511 |
| Cow position: | chr18:36648813-36648965 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 360-519 |
| Cow position: | chr18:26335742-26335585 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 361-515 |
| Cow position: | chr18:970192-970343 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 361-519 |
| Cow position: | chr18:28084467-28084626 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 361-520 |
| Cow position: | chr18:3081530-3081370 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 362-514 |
| Cow position: | chr18:15485781-15485628 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 368-518 |
| Cow position: | chr18:51487482-51487332 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 368-542 |
| Cow position: | chr18:17323802-17323974 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 370-544 |
| Cow position: | chr18:43284884-43284718 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-517 |
| Cow position: | chr18:29946881-29947028 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 372-522 |
| Cow position: | chr18:12241252-12241400 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 372-539 |
| Cow position: | chr18:27833995-27833830 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 375-544 |
| Cow position: | chr18:9364984-9365144 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 384-544 |
| Cow position: | chr18:27800439-27800280 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 126 |
| Conread position: | 399-523 |
| Cow position: | chr18:44229771-44229646 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 406-507 |
| Cow position: | chr18:51692355-51692253 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 409-544 |
| Cow position: | chr18:51713594-51713462 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.