Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 353-508 |
| Cow position: | chr20:13955002-13955161 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 353-517 |
| Cow position: | chr20:10839077-10838917 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 155, 39 |
| Conread position: | 353-519 |
| Cow position: | chr20:26999876-27000044 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-520 |
| Cow position: | chr20:18322176-18322015 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 353-520 |
| Cow position: | chr20:19364506-19364334 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-522 |
| Cow position: | chr20:9996917-9997089 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 353-536 |
| Cow position: | chr20:28165223-28165405 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 56, 168 |
| Conread position: | 353-538 |
| Cow position: | chr20:15295399-15295581 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 353-540 |
| Cow position: | chr20:6550617-6550432 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr20:7597476-7597296 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 353-540 |
| Cow position: | chr20:17657851-17657666 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr20:22209002-22209187 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr20:23466268-23466084 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 353-540 |
| Cow position: | chr20:28725140-28725325 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 353-540 |
| Cow position: | chr20:33563798-33563983 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr20:35036999-35036814 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-541 |
| Cow position: | chr20:36311122-36310936 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-544 |
| Cow position: | chr20:5077331-5077525 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 172 |
| Conread position: | 353-544 |
| Cow position: | chr20:12155980-12155802 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 353-544 |
| Cow position: | chr20:12333062-12333244 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 353-547 |
| Cow position: | chr20:14877441-14877631 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-547 |
| Cow position: | chr20:21015614-21015418 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 68 |
| Conread position: | 354-519 |
| Cow position: | chr20:10035364-10035202 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 354-544 |
| Cow position: | chr20:25330782-25330594 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 355-511 |
| Cow position: | chr20:27994141-27993985 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-514 |
| Cow position: | chr20:13575165-13575006 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 356-514 |
| Cow position: | chr20:15089988-15089828 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 356-519 |
| Cow position: | chr20:32351984-32352143 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 356-544 |
| Cow position: | chr20:23106790-23106975 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 357-518 |
| Cow position: | chr20:3468766-3468922 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 358-508 |
| Cow position: | chr20:14473060-14472913 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 358-511 |
| Cow position: | chr20:42254659-42254505 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 358-544 |
| Cow position: | chr20:3782318-3782131 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 38, 179 |
| Conread position: | 359-544 |
| Cow position: | chr20:7512549-7512371 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 359-551 |
| Cow position: | chr20:6258907-6258717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 152, 27 |
| Conread position: | 360-540 |
| Cow position: | chr20:10921538-10921360 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 149 |
| Conread position: | 361-517 |
| Cow position: | chr20:36418333-36418177 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 361-518 |
| Cow position: | chr20:13789453-13789608 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 361-540 |
| Cow position: | chr20:23802539-23802716 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 363-542 |
| Cow position: | chr20:2178976-2178798 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 367-515 |
| Cow position: | chr20:27896055-27895905 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 367-542 |
| Cow position: | chr20:7568577-7568401 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 143, 170 |
| Conread position: | 367-542 |
| Cow position: | chr20:7593064-7592887 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 368-517 |
| Cow position: | chr20:13325490-13325639 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 371-540 |
| Cow position: | chr20:5538544-5538710 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 372-544 |
| Cow position: | chr20:24522587-24522750 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 382-518 |
| Cow position: | chr20:13055922-13055789 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 388-521 |
| Cow position: | chr20:15240623-15240489 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 398-517 |
| Cow position: | chr20:12553132-12553012 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 69 |
Show alignments to all cow chromosomes.