Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 347-518 |
| Cow position: | chr22:6924345-6924514 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 347-540 |
| Cow position: | chr22:36188366-36188555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 353-503 |
| Cow position: | chr22:29397402-29397553 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-504 |
| Cow position: | chr22:18603493-18603341 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-509 |
| Cow position: | chr22:14510199-14510043 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-511 |
| Cow position: | chr22:2415216-2415375 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-514 |
| Cow position: | chr22:46033544-46033704 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 353-515 |
| Cow position: | chr22:37032560-37032392 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-517 |
| Cow position: | chr22:8876358-8876529 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 165 |
| Conread position: | 353-518 |
| Cow position: | chr22:1517724-1517558 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 353-518 |
| Cow position: | chr22:1522156-1521990 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 353-518 |
| Cow position: | chr22:10313945-10314107 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 353-518 |
| Cow position: | chr22:18811597-18811432 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-518 |
| Cow position: | chr22:32894226-32894391 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 158 |
| Conread position: | 353-518 |
| Cow position: | chr22:34171768-34171933 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 353-519 |
| Cow position: | chr22:14817323-14817164 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 353-519 |
| Cow position: | chr22:36541048-36540881 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 353-520 |
| Cow position: | chr22:45845220-45845387 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 353-522 |
| Cow position: | chr22:36192978-36193143 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 353-540 |
| Cow position: | chr22:3433645-3433460 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:9269517-9269702 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:12225583-12225401 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 353-540 |
| Cow position: | chr22:15308644-15308459 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr22:18807916-18807731 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:19140388-19140203 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-540 |
| Cow position: | chr22:19600488-19600298 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 353-540 |
| Cow position: | chr22:21592741-21592926 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:22048882-22048697 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:27386238-27386053 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 353-540 |
| Cow position: | chr22:29553865-29553681 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 353-540 |
| Cow position: | chr22:31315861-31316046 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:31331554-31331369 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:32209930-32210115 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:33951641-33951456 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr22:39465223-39465038 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr22:42500048-42499863 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-541 |
| Cow position: | chr22:35910170-35909981 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 56, 159 |
| Conread position: | 353-542 |
| Cow position: | chr22:1591355-1591541 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 353-544 |
| Cow position: | chr22:865409-865224 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 353-544 |
| Cow position: | chr22:5331460-5331272 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 155, 55 |
| Conread position: | 353-544 |
| Cow position: | chr22:11305204-11305394 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 353-544 |
| Cow position: | chr22:12728344-12728160 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 95 |
| Conread position: | 353-544 |
| Cow position: | chr22:17834511-17834319 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 166, 14 |
| Conread position: | 353-544 |
| Cow position: | chr22:22285313-22285502 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 353-544 |
| Cow position: | chr22:24817445-24817258 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 353-544 |
| Cow position: | chr22:26167478-26167293 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 353-555 |
| Cow position: | chr22:42994491-42994687 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 355-511 |
| Cow position: | chr22:21935549-21935393 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 356-504 |
| Cow position: | chr22:9371678-9371827 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 356-508 |
| Cow position: | chr22:5835868-5836020 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-514 |
| Cow position: | chr22:10361244-10361403 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 356-516 |
| Cow position: | chr22:12625238-12625078 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 155 |
| Conread position: | 356-518 |
| Cow position: | chr22:26759281-26759443 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 356-538 |
| Cow position: | chr22:3941378-3941558 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-540 |
| Cow position: | chr22:37290532-37290351 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 356-542 |
| Cow position: | chr22:43789048-43789230 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 57, 161 |
| Conread position: | 356-543 |
| Cow position: | chr22:48271712-48271521 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 356-544 |
| Cow position: | chr22:3065482-3065296 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 356-544 |
| Cow position: | chr22:23582493-23582307 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 356-544 |
| Cow position: | chr22:35755371-35755185 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 166 |
| Conread position: | 356-544 |
| Cow position: | chr22:36555828-36555640 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 180 |
| Conread position: | 356-546 |
| Cow position: | chr22:34931759-34931570 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 357-517 |
| Cow position: | chr22:42234098-42234256 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 357-541 |
| Cow position: | chr22:43280161-43279979 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 149 |
| Conread position: | 357-544 |
| Cow position: | chr22:32951551-32951741 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 358-514 |
| Cow position: | chr22:6722247-6722090 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 361-518 |
| Cow position: | chr22:32359208-32359050 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-544 |
| Cow position: | chr22:15872117-15872298 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 362-544 |
| Cow position: | chr22:33113460-33113642 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 363-544 |
| Cow position: | chr22:39695418-39695600 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 146, 40 |
| Conread position: | 375-511 |
| Cow position: | chr22:19828851-19828710 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 376-544 |
| Cow position: | chr22:24905846-24906017 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 377-517 |
| Cow position: | chr22:8505012-8505153 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 377-519 |
| Cow position: | chr22:8480767-8480910 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 378-542 |
| Cow position: | chr22:6493215-6493380 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 383-537 |
| Cow position: | chr22:26019352-26019197 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 392-518 |
| Cow position: | chr22:556970-556845 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 397-548 |
| Cow position: | chr22:14699752-14699600 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 421-519 |
| Cow position: | chr22:22159901-22159999 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.