Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 352-544 |
| Cow position: | chr24:39482574-39482759 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 353-508 |
| Cow position: | chr24:28688815-28688971 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-512 |
| Cow position: | chr24:28497731-28497570 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-514 |
| Cow position: | chr24:17368518-17368358 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 353-517 |
| Cow position: | chr24:16266853-16267021 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 353-518 |
| Cow position: | chr24:6412882-6413047 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-519 |
| Cow position: | chr24:16908701-16908868 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 353-521 |
| Cow position: | chr24:25677115-25677284 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 353-538 |
| Cow position: | chr24:20283808-20283625 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr24:6035777-6035592 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr24:11940165-11940350 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr24:16558876-16558696 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 353-540 |
| Cow position: | chr24:17544540-17544355 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr24:18223077-18222890 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 353-540 |
| Cow position: | chr24:22975211-22975397 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 168 |
| Conread position: | 353-540 |
| Cow position: | chr24:23052483-23052295 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr24:30870565-30870380 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 353-540 |
| Cow position: | chr24:40467009-40466824 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-541 |
| Cow position: | chr24:17161574-17161388 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-544 |
| Cow position: | chr24:5608416-5608224 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 161 |
| Conread position: | 353-544 |
| Cow position: | chr24:16056460-16056274 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 353-544 |
| Cow position: | chr24:41062858-41063050 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 169 |
| Conread position: | 353-547 |
| Cow position: | chr24:29190687-29190879 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 356-519 |
| Cow position: | chr24:45009595-45009754 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 356-540 |
| Cow position: | chr24:33937336-33937517 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 356-544 |
| Cow position: | chr24:5862948-5862761 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 356-544 |
| Cow position: | chr24:32361449-32361267 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 356-544 |
| Cow position: | chr24:39258255-39258435 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 356-555 |
| Cow position: | chr24:32608718-32608914 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 357-504 |
| Cow position: | chr24:45217022-45216874 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 358-518 |
| Cow position: | chr24:7404508-7404353 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 358-544 |
| Cow position: | chr24:17105470-17105284 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 109, 156 |
| Conread position: | 359-519 |
| Cow position: | chr24:12347984-12347823 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-540 |
| Cow position: | chr24:33053610-33053423 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 361-518 |
| Cow position: | chr24:32849550-32849707 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 153 |
| Conread position: | 361-540 |
| Cow position: | chr24:9549675-9549851 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 367-544 |
| Cow position: | chr24:30765741-30765915 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 144 |
| Conread position: | 368-544 |
| Cow position: | chr24:39956692-39956517 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 369-544 |
| Cow position: | chr24:33575681-33575856 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 372-544 |
| Cow position: | chr24:26847183-26847010 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 377-522 |
| Cow position: | chr24:40445096-40445240 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 377-544 |
| Cow position: | chr24:25110676-25110840 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 134 |
| Conread position: | 395-517 |
| Cow position: | chr24:39122891-39123015 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 408-502 |
| Cow position: | chr24:39680972-39681065 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 409-540 |
| Cow position: | chr24:19677878-19678006 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.