Cow genome map
| Conread name: | LyN1-MLN01H100041 |
| Conread position: | 347-542 |
| Cow position: | chr25:25509986-25510177 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 350-517 |
| Cow position: | chr25:16801538-16801705 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 353-504 |
| Cow position: | chr25:13430011-13429859 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 353-511 |
| Cow position: | chr25:4522710-4522551 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 353-512 |
| Cow position: | chr25:13787075-13787234 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-514 |
| Cow position: | chr25:17995189-17995031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 112 |
| Conread position: | 353-518 |
| Cow position: | chr25:9413448-9413613 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 353-518 |
| Cow position: | chr25:39386728-39386563 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-518 |
| Cow position: | chr25:41121105-41121270 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 353-520 |
| Cow position: | chr25:41356696-41356526 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 353-538 |
| Cow position: | chr25:12939106-12938923 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 56, 161 |
| Conread position: | 353-540 |
| Cow position: | chr25:18886380-18886198 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 353-540 |
| Cow position: | chr25:22151206-22151391 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 353-540 |
| Cow position: | chr25:24655073-24654888 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 353-540 |
| Cow position: | chr25:28275567-28275382 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 353-540 |
| Cow position: | chr25:28862973-28863158 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-540 |
| Cow position: | chr25:35755142-35754959 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 353-541 |
| Cow position: | chr25:29802644-29802458 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 353-544 |
| Cow position: | chr25:393367-393550 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 353-544 |
| Cow position: | chr25:2594863-2595056 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 354-519 |
| Cow position: | chr25:15367838-15368004 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 354-544 |
| Cow position: | chr25:24637038-24636854 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 355-518 |
| Cow position: | chr25:17562143-17562305 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 355-544 |
| Cow position: | chr25:2516105-2516296 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 155, 48 |
| Conread position: | 356-544 |
| Cow position: | chr25:7800116-7800306 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 160 |
| Conread position: | 356-544 |
| Cow position: | chr25:11043723-11043905 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 356-546 |
| Cow position: | chr25:34013650-34013462 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 356-546 |
| Cow position: | chr25:34767795-34767972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 176, 40 |
| Conread position: | 356-550 |
| Cow position: | chr25:34503118-34502926 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 358-515 |
| Cow position: | chr25:24228232-24228073 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 359-559 |
| Cow position: | chr25:41098091-41097893 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 360-544 |
| Cow position: | chr25:18129315-18129490 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 361-518 |
| Cow position: | chr25:16430909-16430752 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 361-519 |
| Cow position: | chr25:18424404-18424563 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 361-542 |
| Cow position: | chr25:30526266-30526086 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 361-544 |
| Cow position: | chr25:14393984-14393803 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 368-520 |
| Cow position: | chr25:20495660-20495813 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 368-540 |
| Cow position: | chr25:14954921-14954751 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 368-544 |
| Cow position: | chr25:20613651-20613823 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 142 |
| Conread position: | 379-533 |
| Cow position: | chr25:20006276-20006429 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 383-540 |
| Cow position: | chr25:29216998-29216841 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 385-549 |
| Cow position: | chr25:24459588-24459428 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 402-511 |
| Cow position: | chr25:3172266-3172158 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.