Cow genome map
| Conread name: | LyN1-MLN01H100041 | 
| Conread position: | 316-544 | 
| Cow position: | chr3:75479068-75479292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 102, 60 | 
| Conread position: | 347-504 | 
| Cow position: | chr3:13291344-13291499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 65, 9 | 
| Conread position: | 350-518 | 
| Cow position: | chr3:26532767-26532598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 63, 162 | 
| Conread position: | 350-540 | 
| Cow position: | chr3:23287097-23286909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 59, 161 | 
| Conread position: | 350-544 | 
| Cow position: | chr3:32220951-32221142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 59, 92 | 
| Conread position: | 352-514 | 
| Cow position: | chr3:27866905-27867066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 58, 7 | 
| Conread position: | 353-503 | 
| Cow position: | chr3:10243902-10244053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 353-508 | 
| Cow position: | chr3:59607535-59607690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 353-511 | 
| Cow position: | chr3:8391601-8391757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 353-514 | 
| Cow position: | chr3:54653932-54653770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 353-515 | 
| Cow position: | chr3:31748921-31749083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 26, 19 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:6864901-6865065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:23010598-23010762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 56, 156 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:24442860-24442696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:25753496-25753660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:33125012-33124848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:43190027-43189866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 56, 87 | 
| Conread position: | 353-517 | 
| Cow position: | chr3:58766386-58766551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:7677734-7677898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:11411806-11411641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 56, 95 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:17864671-17864837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 28, 157 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:26993367-26993532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 60, 156 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:56645088-56644923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 56, 156 | 
| Conread position: | 353-518 | 
| Cow position: | chr3:57835409-57835243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 60, 131 | 
| Conread position: | 353-519 | 
| Cow position: | chr3:11384555-11384721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 56, 156 | 
| Conread position: | 353-519 | 
| Cow position: | chr3:58950704-58950869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 353-523 | 
| Cow position: | chr3:12673134-12672963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 60, 68 | 
| Conread position: | 353-537 | 
| Cow position: | chr3:15988182-15988364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 56, 158 | 
| Conread position: | 353-539 | 
| Cow position: | chr3:5951381-5951197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 59, 161 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:5887128-5887311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 56, 70 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:7476678-7476492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 56, 154 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:11784606-11784787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:18814748-18814933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 56, 70 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:19216142-19216328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 53, 159 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:19753492-19753307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 56, 161 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:21100046-21100231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:23204435-23204249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 56, 154 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:36874818-36874633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:38869809-38869993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 58, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:40826639-40826824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 58, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:46506011-46506196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 56, 161 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:48603495-48603689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 56, 162 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:49416604-49416419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:49541965-49541780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 56, 152 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:56148538-56148723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:59864722-59864907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:72633316-72633500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 353-540 | 
| Cow position: | chr3:75038599-75038414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-542 | 
| Cow position: | chr3:29130337-29130521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 56, 28 | 
| Conread position: | 353-542 | 
| Cow position: | chr3:37983123-37982936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 56, 156 | 
| Conread position: | 353-542 | 
| Cow position: | chr3:42500313-42500491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 353-543 | 
| Cow position: | chr3:45977742-45977930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-543 | 
| Cow position: | chr3:70322433-70322244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 39, 157 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:17937775-17937584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 56, 158 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:18460452-18460254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 50, 33 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:24585988-24585797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 60, 109 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:31934095-31933906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 60, 158 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:40101614-40101428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 56, 19 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:52651712-52651522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 60, 157 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:54863377-54863191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 56, 42 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:59118536-59118347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 56, 157 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:64293768-64293952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 61, 27 | 
| Conread position: | 353-544 | 
| Cow position: | chr3:76136561-76136753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 56, 161 | 
| Conread position: | 353-545 | 
| Cow position: | chr3:61677778-61677968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 100, 95 | 
| Conread position: | 353-547 | 
| Cow position: | chr3:47272636-47272444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 353-551 | 
| Cow position: | chr3:64282073-64281887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 354-544 | 
| Cow position: | chr3:6897070-6897260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 64, 160 | 
| Conread position: | 355-522 | 
| Cow position: | chr3:64277980-64278147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 157, 12 | 
| Conread position: | 355-540 | 
| Cow position: | chr3:16332666-16332852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 162, 12 | 
| Conread position: | 355-544 | 
| Cow position: | chr3:34393042-34392853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 54, 129 | 
| Conread position: | 356-504 | 
| Cow position: | chr3:33269472-33269618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 53, 84 | 
| Conread position: | 356-515 | 
| Cow position: | chr3:33326632-33326795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 57, 43 | 
| Conread position: | 356-516 | 
| Cow position: | chr3:15656069-15655909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 53, 24 | 
| Conread position: | 356-519 | 
| Cow position: | chr3:46349471-46349634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 53, 41 | 
| Conread position: | 356-528 | 
| Cow position: | chr3:37451346-37451519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 31, 171 | 
| Conread position: | 356-540 | 
| Cow position: | chr3:35619798-35619980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 53, 150 | 
| Conread position: | 356-540 | 
| Cow position: | chr3:69930590-69930409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 53, 36 | 
| Conread position: | 356-540 | 
| Cow position: | chr3:73451068-73450886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 53, 150 | 
| Conread position: | 356-540 | 
| Cow position: | chr3:78024190-78024012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 53, 97 | 
| Conread position: | 356-544 | 
| Cow position: | chr3:16657629-16657441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 57, 180 | 
| Conread position: | 356-544 | 
| Cow position: | chr3:39970822-39970638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 25 | 
| Conread position: | 356-544 | 
| Cow position: | chr3:67745533-67745340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 57, 162 | 
| Conread position: | 358-518 | 
| Cow position: | chr3:23944212-23944372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 55, 153 | 
| Conread position: | 358-544 | 
| Cow position: | chr3:22352861-22353045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 51, 156 | 
| Conread position: | 358-544 | 
| Cow position: | chr3:49133152-49132971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 51, 37 | 
| Conread position: | 359-518 | 
| Cow position: | chr3:63276274-63276118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 360-539 | 
| Cow position: | chr3:66623436-66623613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 49, 63 | 
| Conread position: | 361-518 | 
| Cow position: | chr3:83911817-83911975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 361-519 | 
| Cow position: | chr3:55454812-55454653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 48, 73 | 
| Conread position: | 361-532 | 
| Cow position: | chr3:54347154-54346987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 361-538 | 
| Cow position: | chr3:14748581-14748406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 159, 0 | 
| Conread position: | 361-542 | 
| Cow position: | chr3:16114654-16114835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 20, 153 | 
| Conread position: | 361-544 | 
| Cow position: | chr3:19824816-19824634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 170, 149 | 
| Conread position: | 361-559 | 
| Cow position: | chr3:51490545-51490745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 33, 83 | 
| Conread position: | 362-542 | 
| Cow position: | chr3:16869154-16868976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 53, 149 | 
| Conread position: | 363-544 | 
| Cow position: | chr3:65581942-65581761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 52, 149 | 
| Conread position: | 364-511 | 
| Cow position: | chr3:80564054-80564202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 367-544 | 
| Cow position: | chr3:56697094-56697269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 42, 139 | 
| Conread position: | 371-544 | 
| Cow position: | chr3:57481484-57481314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 137, 0 | 
| Conread position: | 372-541 | 
| Cow position: | chr3:14279941-14280105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 37, 134 | 
| Conread position: | 374-512 | 
| Cow position: | chr3:21303324-21303181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 375-519 | 
| Cow position: | chr3:36403377-36403522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 375-547 | 
| Cow position: | chr3:13276013-13275843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 34, 134 | 
| Conread position: | 383-511 | 
| Cow position: | chr3:523481-523611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 385-544 | 
| Cow position: | chr3:18246308-18246152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 24, 124 | 
| Conread position: | 388-540 | 
| Cow position: | chr3:5989286-5989136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 21, 121 | 
| Conread position: | 393-547 | 
| Cow position: | chr3:28675098-28675251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 399-544 | 
| Cow position: | chr3:70890735-70890878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 134, 114 | 
Show alignments to all cow chromosomes.
