Cow genome map

Conread name: LyN1-MLN01H100041

Conread position: 352-540
Cow position: chr5:29968756-29968941 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 7

Conread position: 352-541
Cow position: chr5:7042390-7042575 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 352-542
Cow position: chr5:49565717-49565899 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 353-512
Cow position: chr5:72046515-72046355 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 44

Conread position: 353-514
Cow position: chr5:25496261-25496099 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 353-517
Cow position: chr5:2917610-2917773 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 69

Conread position: 353-517
Cow position: chr5:8178282-8178446 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr5:411571-411406 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr5:6671021-6670864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 56

Conread position: 353-518
Cow position: chr5:14313418-14313583 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 158

Conread position: 353-518
Cow position: chr5:44709224-44709059 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 60, 161

Conread position: 353-518
Cow position: chr5:69519748-69519914 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 140
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 353-518
Cow position: chr5:76098882-76098717 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 153

Conread position: 353-519
Cow position: chr5:32697643-32697477 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 23

Conread position: 353-519
Cow position: chr5:32964912-32964745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 353-520
Cow position: chr5:49132342-49132507 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 42

Conread position: 353-523
Cow position: chr5:54088864-54089031 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 353-538
Cow position: chr5:10921993-10922176 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:3500980-3500795 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:3789372-3789556 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 14

Conread position: 353-540
Cow position: chr5:12921546-12921730 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 69

Conread position: 353-540
Cow position: chr5:18250200-18250380 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 85

Conread position: 353-540
Cow position: chr5:19978766-19978582 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:21189369-21189551 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 353-540
Cow position: chr5:24101798-24101983 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:24299161-24299346 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 156

Conread position: 353-540
Cow position: chr5:29742413-29742228 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 156

Conread position: 353-540
Cow position: chr5:30582474-30582659 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:43437794-43437609 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 161

Conread position: 353-540
Cow position: chr5:43984232-43984417 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 161

Conread position: 353-540
Cow position: chr5:46676761-46676946 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:47343021-47343207 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 161

Conread position: 353-540
Cow position: chr5:53185355-53185170 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 153

Conread position: 353-540
Cow position: chr5:54785960-54785775 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:55631212-55631397 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:58245480-58245665 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 19

Conread position: 353-540
Cow position: chr5:58770724-58770539 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr5:64778854-64778668 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 154

Conread position: 353-540
Cow position: chr5:73485738-73485553 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 161

Conread position: 353-542
Cow position: chr5:36724576-36724393 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 14

Conread position: 353-544
Cow position: chr5:16207010-16206822 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 76

Conread position: 353-544
Cow position: chr5:18491550-18491749 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 353-544
Cow position: chr5:34300030-34300219 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 16

Conread position: 353-544
Cow position: chr5:40828231-40828042 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 56, 86

Conread position: 353-544
Cow position: chr5:41951916-41951727 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 83

Conread position: 353-544
Cow position: chr5:47854975-47855163 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 158

Conread position: 353-544
Cow position: chr5:49521847-49522040 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 173

Conread position: 353-544
Cow position: chr5:50599207-50599394 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 353-544
Cow position: chr5:66337999-66338182 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 151

Conread position: 353-545
Cow position: chr5:67654474-67654665 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 43

Conread position: 353-547
Cow position: chr5:62159777-62159582 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 76

Conread position: 353-548
Cow position: chr5:4629909-4630104 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 15

Conread position: 353-551
Cow position: chr5:33775636-33775440 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 354-517
Cow position: chr5:1780433-1780269 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 112

Conread position: 354-544
Cow position: chr5:62377516-62377701 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 355-518
Cow position: chr5:23845401-23845239 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 17

Conread position: 356-514
Cow position: chr5:21827970-21828130 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 53, 12

Conread position: 356-517
Cow position: chr5:48574676-48574513 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 356-518
Cow position: chr5:280029-279867 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 150

Conread position: 356-539
Cow position: chr5:26100881-26101067 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 163

Conread position: 356-540
Cow position: chr5:1338770-1338588 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 53, 150

Conread position: 356-540
Cow position: chr5:54337053-54337235 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 150

Conread position: 356-543
Cow position: chr5:72007742-72007554 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 356-544
Cow position: chr5:42743942-42744127 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 356-544
Cow position: chr5:58145490-58145313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 357-518
Cow position: chr5:37735528-37735688 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 94

Conread position: 357-540
Cow position: chr5:14636427-14636246 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 149

Conread position: 357-541
Cow position: chr5:5682359-5682171 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 150

Conread position: 358-521
Cow position: chr5:1344736-1344573 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 55, 22

Conread position: 359-522
Cow position: chr5:5787176-5787012 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 359-544
Cow position: chr5:12558427-12558240 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 155

Conread position: 359-544
Cow position: chr5:14833484-14833294 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 23

Conread position: 360-544
Cow position: chr5:4165787-4165962 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 360-544
Cow position: chr5:52646185-52646006 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 146

Conread position: 361-505
Cow position: chr5:16100405-16100260 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 7

Conread position: 361-511
Cow position: chr5:27491132-27491284 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 361-517
Cow position: chr5:15856073-15855919 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 88

Conread position: 361-544
Cow position: chr5:22857477-22857296 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 154

Conread position: 361-544
Cow position: chr5:34532772-34532955 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 361-544
Cow position: chr5:36406312-36406495 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 150

Conread position: 361-551
Cow position: chr5:31503301-31503494 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 187

Conread position: 364-519
Cow position: chr5:47081353-47081507 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 146

Conread position: 367-518
Cow position: chr5:46797062-46797213 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 144

Conread position: 367-518
Cow position: chr5:59771210-59771359 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 99

Conread position: 368-540
Cow position: chr5:7396406-7396576 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 138

Conread position: 375-511
Cow position: chr5:26466795-26466931 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 382-544
Cow position: chr5:742283-742123 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 132

Conread position: 382-544
Cow position: chr5:6840011-6839844 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 69

Conread position: 383-544
Cow position: chr5:34637617-34637780 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 131

Conread position: 384-544
Cow position: chr5:72345663-72345505 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 135

Conread position: 387-540
Cow position: chr5:7277052-7277203 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 37

Conread position: 395-511
Cow position: chr5:72172192-72172309 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 401-551
Cow position: chr5:29122832-29122683 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 116

Conread position: 408-540
Cow position: chr5:3544500-3544629 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 105, 0

Show alignments to all cow chromosomes.