Cow genome map

Conread name: LyN1-MLN01H100041

Conread position: 347-517
Cow position: chr6:27526680-27526515 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 9

Conread position: 351-540
Cow position: chr6:11721923-11721735 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 158

Conread position: 352-538
Cow position: chr6:20552955-20552773 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 17

Conread position: 353-507
Cow position: chr6:2111113-2110958 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 353-508
Cow position: chr6:7191325-7191172 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 43

Conread position: 353-508
Cow position: chr6:53461892-53461736 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 353-512
Cow position: chr6:35704230-35704070 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 353-513
Cow position: chr6:34548320-34548481 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 353-513
Cow position: chr6:40975455-40975616 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 353-515
Cow position: chr6:33896354-33896192 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 27

Conread position: 353-518
Cow position: chr6:34493962-34494127 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr6:34504234-34504069 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr6:36531561-36531726 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr6:40550413-40550248 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 162

Conread position: 353-519
Cow position: chr6:55474593-55474759 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 161

Conread position: 353-520
Cow position: chr6:478837-479007 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 353-521
Cow position: chr6:12535007-12535170 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 353-528
Cow position: chr6:28136039-28136214 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 19

Conread position: 353-536
Cow position: chr6:34843426-34843243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 145

Conread position: 353-538
Cow position: chr6:35600965-35601147 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 156

Conread position: 353-539
Cow position: chr6:8754168-8753984 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 56, 153

Conread position: 353-539
Cow position: chr6:10681271-10681455 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 158

Conread position: 353-539
Cow position: chr6:24242574-24242758 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:3485132-3484947 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:5946488-5946303 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:8205474-8205659 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:8535507-8535326 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 353-540
Cow position: chr6:15137886-15137701 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 153

Conread position: 353-540
Cow position: chr6:15275953-15275768 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 156

Conread position: 353-540
Cow position: chr6:16593237-16593420 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 43

Conread position: 353-540
Cow position: chr6:17049660-17049845 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 153

Conread position: 353-540
Cow position: chr6:17111878-17111694 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 31

Conread position: 353-540
Cow position: chr6:20451247-20451431 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 39

Conread position: 353-540
Cow position: chr6:35873442-35873260 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 353-540
Cow position: chr6:39331246-39331061 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:40863745-40863560 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 162

Conread position: 353-540
Cow position: chr6:48873037-48872852 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:50571478-50571663 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 150

Conread position: 353-540
Cow position: chr6:51717841-51718029 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 159

Conread position: 353-540
Cow position: chr6:51733368-51733553 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 152

Conread position: 353-540
Cow position: chr6:55538984-55538799 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr6:60332630-60332817 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 169

Conread position: 353-541
Cow position: chr6:1245634-1245448 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-541
Cow position: chr6:7467363-7467178 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 14

Conread position: 353-542
Cow position: chr6:28102582-28102399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 353-542
Cow position: chr6:39999172-39998985 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 152

Conread position: 353-544
Cow position: chr6:47380970-47381160 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 168

Conread position: 353-544
Cow position: chr6:54472359-54472176 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 99

Conread position: 353-544
Cow position: chr6:56842308-56842499 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 157

Conread position: 353-551
Cow position: chr6:55903376-55903571 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 153

Conread position: 354-521
Cow position: chr6:28549747-28549580 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 18

Conread position: 356-517
Cow position: chr6:41231778-41231938 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 36

Conread position: 356-519
Cow position: chr6:50526800-50526963 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 36

Conread position: 356-540
Cow position: chr6:17121680-17121861 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 28

Conread position: 356-540
Cow position: chr6:60876586-60876767 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 150

Conread position: 356-544
Cow position: chr6:9839847-9839652 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 356-544
Cow position: chr6:10695012-10695197 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 154, 0

Conread position: 356-544
Cow position: chr6:38438896-38439087 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 159

Conread position: 356-544
Cow position: chr6:41677219-41677405 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 356-544
Cow position: chr6:57857060-57857246 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 153

Conread position: 356-544
Cow position: chr6:58915046-58914862 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 53, 118

Conread position: 357-540
Cow position: chr6:11289176-11288995 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 149

Conread position: 357-540
Cow position: chr6:58031068-58031248 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 154

Conread position: 358-518
Cow position: chr6:706290-706450 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 148

Conread position: 358-544
Cow position: chr6:65941719-65941533 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 155

Conread position: 359-543
Cow position: chr6:32286844-32287029 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 359-544
Cow position: chr6:1274555-1274378 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 21

Conread position: 361-508
Cow position: chr6:66751067-66751212 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 361-521
Cow position: chr6:2087818-2087979 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 124

Conread position: 361-540
Cow position: chr6:15471518-15471342 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 150

Conread position: 361-543
Cow position: chr6:52240535-52240356 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 11

Conread position: 362-506
Cow position: chr6:61180920-61180776 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 364-544
Cow position: chr6:19059574-19059748 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 147

Conread position: 368-518
Cow position: chr6:1263458-1263608 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 138

Conread position: 368-538
Cow position: chr6:40813663-40813831 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 141

Conread position: 368-540
Cow position: chr6:182249-182081 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 368-542
Cow position: chr6:41409905-41410075 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 371-552
Cow position: chr6:47848623-47848443 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 150

Conread position: 374-544
Cow position: chr6:2545501-2545666 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 137

Conread position: 375-544
Cow position: chr6:7175343-7175176 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 63

Conread position: 375-544
Cow position: chr6:32271896-32271734 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 85

Conread position: 376-514
Cow position: chr6:15181467-15181606 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 379-517
Cow position: chr6:60455977-60456118 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 381-544
Cow position: chr6:11193268-11193105 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 131

Conread position: 387-542
Cow position: chr6:42420439-42420592 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 26

Conread position: 387-544
Cow position: chr6:3893314-3893159 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 387-544
Cow position: chr6:32018780-32018628 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 134, 0

Show alignments to all cow chromosomes.