Cow genome map

Conread name: LyN1-MLN01H100041

Conread position: 262-508
Cow position: chr9:10665037-10665275 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 58

Conread position: 306-542
Cow position: chr9:35592971-35592736 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 205

Conread position: 347-518
Cow position: chr9:61237559-61237383 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 347-542
Cow position: chr9:5414839-5414648 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 9

Conread position: 352-544
Cow position: chr9:4647427-4647237 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 15

Conread position: 352-544
Cow position: chr9:40316352-40316539 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 353-503
Cow position: chr9:8951834-8951682 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 353-507
Cow position: chr9:5628035-5628190 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 353-508
Cow position: chr9:55796890-55796734 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 353-511
Cow position: chr9:29300804-29300647 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 27

Conread position: 353-511
Cow position: chr9:37097821-37097978 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 353-511
Cow position: chr9:51556183-51556342 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 353-515
Cow position: chr9:18506608-18506444 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 353-516
Cow position: chr9:17870722-17870884 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 353-516
Cow position: chr9:19156076-19155913 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 153

Conread position: 353-517
Cow position: chr9:26087787-26087625 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 353-518
Cow position: chr9:1991338-1991173 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chr9:7005957-7006121 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 79

Conread position: 353-518
Cow position: chr9:9016290-9016455 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 153

Conread position: 353-518
Cow position: chr9:10326449-10326614 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 161

Conread position: 353-518
Cow position: chr9:10857249-10857413 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 19

Conread position: 353-538
Cow position: chr9:4305870-4305686 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 34

Conread position: 353-538
Cow position: chr9:29106091-29106274 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-539
Cow position: chr9:9515886-9516066 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 353-540
Cow position: chr9:3756623-3756438 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:5007189-5007366 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 75

Conread position: 353-540
Cow position: chr9:6252780-6252965 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:6764553-6764368 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:7058835-7058650 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 75

Conread position: 353-540
Cow position: chr9:12285492-12285307 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 156

Conread position: 353-540
Cow position: chr9:17302762-17302579 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 44

Conread position: 353-540
Cow position: chr9:21412513-21412704 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 159

Conread position: 353-540
Cow position: chr9:24918072-24917887 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:27038329-27038514 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 153

Conread position: 353-540
Cow position: chr9:28657841-28657656 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:31810793-31810978 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:42570431-42570616 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 152

Conread position: 353-540
Cow position: chr9:42868656-42868471 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chr9:59454681-59454496 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 152

Conread position: 353-542
Cow position: chr9:16178800-16178987 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-542
Cow position: chr9:58615480-58615290 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 19

Conread position: 353-544
Cow position: chr9:5030715-5030527 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 156

Conread position: 353-544
Cow position: chr9:16981853-16981664 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 353-544
Cow position: chr9:17307024-17307210 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 353-544
Cow position: chr9:23028814-23028624 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 60, 158

Conread position: 353-544
Cow position: chr9:23421802-23421994 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 169, 62

Conread position: 353-544
Cow position: chr9:28774051-28773860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 166, 27

Conread position: 353-544
Cow position: chr9:34567862-34568050 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 20

Conread position: 353-545
Cow position: chr9:33068285-33068085 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 353-547
Cow position: chr9:37158396-37158204 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 355-519
Cow position: chr9:11410420-11410585 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 356-511
Cow position: chr9:1856630-1856473 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 84

Conread position: 356-511
Cow position: chr9:30737296-30737140 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 28

Conread position: 356-517
Cow position: chr9:49151405-49151245 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 157, 0

Conread position: 356-518
Cow position: chr9:12161809-12161977 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 116

Conread position: 356-519
Cow position: chr9:20577979-20578145 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 143
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 356-539
Cow position: chr9:217897-217714 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 153

Conread position: 356-540
Cow position: chr9:2173754-2173934 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 47

Conread position: 356-540
Cow position: chr9:22656017-22656199 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 159

Conread position: 356-540
Cow position: chr9:55031723-55031905 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 153

Conread position: 356-540
Cow position: chr9:59539128-59539303 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 84

Conread position: 356-541
Cow position: chr9:19545729-19545912 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 150

Conread position: 356-544
Cow position: chr9:20959014-20959204 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 356-544
Cow position: chr9:20988514-20988698 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 159

Conread position: 356-553
Cow position: chr9:62401103-62400908 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 127

Conread position: 357-518
Cow position: chr9:28822226-28822068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 357-540
Cow position: chr9:59479637-59479456 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 149

Conread position: 358-514
Cow position: chr9:21461683-21461838 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 358-536
Cow position: chr9:25974763-25974589 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 39

Conread position: 360-535
Cow position: chr9:31078135-31078313 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 361-519
Cow position: chr9:44518474-44518317 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 361-541
Cow position: chr9:33845242-33845422 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 88

Conread position: 361-544
Cow position: chr9:26123938-26124117 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 0

Conread position: 361-544
Cow position: chr9:28702673-28702855 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 160

Conread position: 361-544
Cow position: chr9:47263263-47263443 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 94

Conread position: 363-544
Cow position: chr9:44920485-44920673 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 28

Conread position: 367-518
Cow position: chr9:3546048-3546200 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 367-544
Cow position: chr9:10634144-10634320 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 25

Conread position: 368-509
Cow position: chr9:28356193-28356052 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 79

Conread position: 374-542
Cow position: chr9:28725836-28726002 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 140

Conread position: 375-544
Cow position: chr9:38346915-38346753 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 91

Conread position: 376-540
Cow position: chr9:2618546-2618384 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 130

Conread position: 382-542
Cow position: chr9:56528462-56528620 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 129

Conread position: 383-542
Cow position: chr9:12195211-12195054 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 123

Conread position: 386-540
Cow position: chr9:10004631-10004478 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 124

Conread position: 387-544
Cow position: chr9:3730276-3730428 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 125

Conread position: 388-540
Cow position: chr9:52753970-52753820 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 117

Conread position: 397-544
Cow position: chr9:59507955-59507812 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 404-544
Cow position: chr9:9985497-9985359 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 413-511
Cow position: chr9:15949972-15950070 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.