Cow genome map

Conread name: LyN1-MLN01H100041

Conread position: 353-504
Cow position: chrX:20792266-20792412 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 353-508
Cow position: chrX:24425391-24425235 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 353-511
Cow position: chrX:23415571-23415412 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 353-514
Cow position: chrX:1617110-1616949 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 158

Conread position: 353-514
Cow position: chrX:40365621-40365459 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 353-516
Cow position: chrX:7572515-7572673 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 83

Conread position: 353-517
Cow position: chrX:25573476-25573638 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 111

Conread position: 353-518
Cow position: chrX:323038-323204 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 353-518
Cow position: chrX:4995734-4995900 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 353-518
Cow position: chrX:13430665-13430499 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 353-518
Cow position: chrX:16021252-16021088 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 158

Conread position: 353-518
Cow position: chrX:18193814-18193979 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 153

Conread position: 353-518
Cow position: chrX:38150812-38150977 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-519
Cow position: chrX:11744391-11744560 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 353-520
Cow position: chrX:20674992-20675159 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 60, 153

Conread position: 353-521
Cow position: chrX:30354518-30354678 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 47

Conread position: 353-521
Cow position: chrX:33803871-33803701 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 353-536
Cow position: chrX:40693605-40693424 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 158

Conread position: 353-538
Cow position: chrX:35287550-35287733 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 72

Conread position: 353-539
Cow position: chrX:15151551-15151367 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 58, 158

Conread position: 353-539
Cow position: chrX:16702795-16702979 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:865520-865705 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:1550089-1550274 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 153

Conread position: 353-540
Cow position: chrX:4905863-4905681 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 353-540
Cow position: chrX:5354178-5353994 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 27

Conread position: 353-540
Cow position: chrX:12178798-12178988 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 76

Conread position: 353-540
Cow position: chrX:13406162-13405981 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 107

Conread position: 353-540
Cow position: chrX:18950612-18950427 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:19657621-19657806 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:20953657-20953842 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:21226601-21226786 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 153

Conread position: 353-540
Cow position: chrX:21582567-21582752 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:23387414-23387229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:23395731-23395916 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:23452321-23452136 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:24442115-24441930 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:24588610-24588427 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 353-540
Cow position: chrX:27095253-27095438 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:27318355-27318540 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:29700819-29700643 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 100

Conread position: 353-540
Cow position: chrX:29849499-29849320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 15

Conread position: 353-540
Cow position: chrX:30180800-30180618 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 87

Conread position: 353-540
Cow position: chrX:32584807-32584622 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-540
Cow position: chrX:35239996-35240175 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 110

Conread position: 353-540
Cow position: chrX:37134509-37134324 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 153

Conread position: 353-541
Cow position: chrX:15260495-15260309 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-541
Cow position: chrX:37852260-37852449 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 353-542
Cow position: chrX:12465156-12465343 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 153

Conread position: 353-542
Cow position: chrX:25459515-25459327 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 154

Conread position: 353-542
Cow position: chrX:29892211-29892397 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 153

Conread position: 353-544
Cow position: chrX:1729733-1729545 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 14

Conread position: 353-544
Cow position: chrX:4751242-4751059 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 353-544
Cow position: chrX:6543389-6543578 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 163, 9

Conread position: 353-544
Cow position: chrX:13178484-13178294 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 159

Conread position: 353-544
Cow position: chrX:16525914-16526103 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 153

Conread position: 353-544
Cow position: chrX:18898525-18898336 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 353-544
Cow position: chrX:21592415-21592604 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 153

Conread position: 353-544
Cow position: chrX:23341867-23341679 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 153

Conread position: 353-544
Cow position: chrX:23969478-23969667 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 0

Conread position: 353-544
Cow position: chrX:25204460-25204650 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 158

Conread position: 353-547
Cow position: chrX:23572693-23572500 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 154

Conread position: 354-516
Cow position: chrX:18455645-18455482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 354-519
Cow position: chrX:35388794-35388628 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 141
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 0

Conread position: 354-540
Cow position: chrX:26531098-26531282 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 160

Conread position: 354-544
Cow position: chrX:39559232-39559053 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 355-521
Cow position: chrX:2649223-2649059 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 79

Conread position: 356-540
Cow position: chrX:27977707-27977525 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 150

Conread position: 356-542
Cow position: chrX:29880153-29879969 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 150

Conread position: 356-544
Cow position: chrX:620137-619946 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 356-544
Cow position: chrX:7805508-7805690 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 73

Conread position: 357-544
Cow position: chrX:38935550-38935735 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 152

Conread position: 358-519
Cow position: chrX:2524603-2524442 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 10

Conread position: 358-544
Cow position: chrX:8104152-8103969 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 95

Conread position: 359-508
Cow position: chrX:3155452-3155305 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 49

Conread position: 359-517
Cow position: chrX:36839836-36839994 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 152

Conread position: 359-519
Cow position: chrX:31804021-31804178 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 361-514
Cow position: chrX:23218206-23218355 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 361-517
Cow position: chrX:25405240-25405083 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 60

Conread position: 361-518
Cow position: chrX:25282362-25282204 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 151

Conread position: 361-520
Cow position: chrX:37832332-37832174 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 11

Conread position: 361-539
Cow position: chrX:39463915-39463734 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 38, 72

Conread position: 364-544
Cow position: chrX:44193305-44193127 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 155

Conread position: 367-518
Cow position: chrX:15993582-15993733 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 147

Conread position: 367-544
Cow position: chrX:34008889-34009065 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 139

Conread position: 367-547
Cow position: chrX:33822229-33822409 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 83

Conread position: 371-518
Cow position: chrX:20999135-20998988 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 22

Conread position: 372-522
Cow position: chrX:509003-508852 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 378-518
Cow position: chrX:22308428-22308288 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 131

Conread position: 382-544
Cow position: chrX:40788288-40788447 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 384-540
Cow position: chrX:30144129-30143975 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 122

Conread position: 393-544
Cow position: chrX:11083442-11083291 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 138

Conread position: 403-541
Cow position: chrX:11613679-11613819 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 408-518
Cow position: chrX:26633898-26633789 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 408-540
Cow position: chrX:16854206-16854077 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 409-544
Cow position: chrX:16517951-16517819 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 410-533
Cow position: chrX:37781886-37781765 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 414-544
Cow position: chrX:38007799-38007669 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.