Cow genome map
| Conread name: | Lym1-jns23_A07.f |
| Conread position: | 1-336 |
| Cow position: | chr1:63316063-63316412 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 1-341 |
| Cow position: | chr1:84601793-84602165 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 1-358 |
| Cow position: | chr1:32954646-32955009 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 1-501 |
| Cow position: | chr1:42727846-42728363 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 1-503 |
| Cow position: | chr1:97100185-97100689 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 3-497 |
| Cow position: | chr1:12678644-12678156 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 53-357 |
| Cow position: | chr1:43285127-43285453 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 65-376 |
| Cow position: | chr1:30882262-30882578 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 86-371 |
| Cow position: | chr1:67406675-67406388 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 90-359 |
| Cow position: | chr1:71938487-71938757 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 96-378 |
| Cow position: | chr1:55146819-55146536 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 97-502 |
| Cow position: | chr1:2765433-2765029 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 112-373 |
| Cow position: | chr1:30413596-30413325 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 112-503 |
| Cow position: | chr1:14560941-14561319 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 5 |
| Conread position: | 115-375 |
| Cow position: | chr1:31399219-31399488 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 121-353 |
| Cow position: | chr1:58882017-58882250 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 123-502 |
| Cow position: | chr1:56748583-56748199 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 124-383 |
| Cow position: | chr1:97619843-97620110 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 127-502 |
| Cow position: | chr1:29379692-29380051 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 145, 28 |
| Conread position: | 128-367 |
| Cow position: | chr1:23624153-23623905 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 130-503 |
| Cow position: | chr1:56643603-56644000 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 133-359 |
| Cow position: | chr1:52819289-52819071 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 133-373 |
| Cow position: | chr1:20422222-20422467 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 137-359 |
| Cow position: | chr1:71136128-71135907 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 81 |
| Conread position: | 138-502 |
| Cow position: | chr1:22777567-22777955 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 69, 344 |
| Conread position: | 140-359 |
| Cow position: | chr1:92048803-92048589 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 141-373 |
| Cow position: | chr1:99136457-99136690 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 142-358 |
| Cow position: | chr1:64099291-64099508 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 142-369 |
| Cow position: | chr1:67014357-67014128 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 142-387 |
| Cow position: | chr1:45535679-45535428 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 197 |
| Conread position: | 142-503 |
| Cow position: | chr1:50634427-50634779 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 226 |
| Conread position: | 143-376 |
| Cow position: | chr1:86614836-86614603 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 144-348 |
| Cow position: | chr1:73522176-73522379 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 144-357 |
| Cow position: | chr1:51836542-51836327 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 145-503 |
| Cow position: | chr1:29901004-29901354 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 216, 49 |
| Conread position: | 146-489 |
| Cow position: | chr1:74947153-74947499 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 155-358 |
| Cow position: | chr1:19440060-19440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 155-359 |
| Cow position: | chr1:6322165-6321963 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 155-385 |
| Cow position: | chr1:49131155-49131394 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 155-441 |
| Cow position: | chr1:31871386-31871084 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 155-482 |
| Cow position: | chr1:80764577-80764899 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 155-493 |
| Cow position: | chr1:23099860-23099523 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 39, 260 |
| Conread position: | 155-502 |
| Cow position: | chr1:5162088-5162431 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 156-346 |
| Cow position: | chr1:53410956-53411143 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 156-357 |
| Cow position: | chr1:70282896-70282691 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 156-358 |
| Cow position: | chr1:6881266-6881470 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 156-499 |
| Cow position: | chr1:55202664-55202997 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 270, 64 |
| Conread position: | 156-502 |
| Cow position: | chr1:95765130-95765493 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 157-369 |
| Cow position: | chr1:58889336-58889551 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 161-503 |
| Cow position: | chr1:54162852-54163203 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 162-358 |
| Cow position: | chr1:90640976-90640780 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 9 |
| Conread position: | 163-471 |
| Cow position: | chr1:71331599-71331908 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 163-503 |
| Cow position: | chr1:57635405-57635055 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 164-500 |
| Cow position: | chr1:98655766-98656081 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 167-357 |
| Cow position: | chr1:69249232-69249044 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 167-358 |
| Cow position: | chr1:44506917-44506722 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 167-359 |
| Cow position: | chr1:86325659-86325857 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 167-482 |
| Cow position: | chr1:27145701-27146018 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 169-356 |
| Cow position: | chr1:82406606-82406796 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 169-359 |
| Cow position: | chr1:13056581-13056774 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 169-373 |
| Cow position: | chr1:71748063-71748267 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 181-358 |
| Cow position: | chr1:61534436-61534612 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 182-359 |
| Cow position: | chr1:22467862-22467684 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 186-359 |
| Cow position: | chr1:635119-634945 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 188-353 |
| Cow position: | chr1:34892493-34892328 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 188-472 |
| Cow position: | chr1:12871082-12871357 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 188-502 |
| Cow position: | chr1:38401716-38401423 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 173, 15 |
| Conread position: | 188-502 |
| Cow position: | chr1:63905544-63905864 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 188-502 |
| Cow position: | chr1:86020135-86020456 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 190-502 |
| Cow position: | chr1:7731655-7731338 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 190-503 |
| Cow position: | chr1:72791106-72790774 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 146 |
| Conread position: | 193-502 |
| Cow position: | chr1:78794816-78795120 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 194-371 |
| Cow position: | chr1:59557646-59557464 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 200-370 |
| Cow position: | chr1:7583637-7583466 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 201-454 |
| Cow position: | chr1:75833758-75834022 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 202-358 |
| Cow position: | chr1:81371758-81371917 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 202-401 |
| Cow position: | chr1:65103547-65103347 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 203-359 |
| Cow position: | chr1:39418213-39418364 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 203-403 |
| Cow position: | chr1:74084287-74084479 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 203-407 |
| Cow position: | chr1:81868818-81869021 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 204-381 |
| Cow position: | chr1:2659148-2658966 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 207-377 |
| Cow position: | chr1:91450423-91450249 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 208-341 |
| Cow position: | chr1:52863111-52863246 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 208-358 |
| Cow position: | chr1:86709109-86709262 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 208-397 |
| Cow position: | chr1:52774616-52774805 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 17 |
| Conread position: | 208-502 |
| Cow position: | chr1:3872758-3872470 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 192 |
| Conread position: | 209-502 |
| Cow position: | chr1:84226470-84226765 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 212-358 |
| Cow position: | chr1:46218483-46218338 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 217-375 |
| Cow position: | chr1:85410239-85410402 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 115 |
| Conread position: | 217-377 |
| Cow position: | chr1:99691052-99690891 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 217-380 |
| Cow position: | chr1:39718915-39718745 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 217-502 |
| Cow position: | chr1:15028577-15028310 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 218-375 |
| Cow position: | chr1:56408513-56408351 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 218-390 |
| Cow position: | chr1:61736996-61736826 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 220-468 |
| Cow position: | chr1:74532397-74532648 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 221-367 |
| Cow position: | chr1:33441825-33441973 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 221-381 |
| Cow position: | chr1:57646571-57646413 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 221-501 |
| Cow position: | chr1:80973721-80973989 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 55, 173 |
| Conread position: | 221-502 |
| Cow position: | chr1:98613134-98612844 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 222-383 |
| Cow position: | chr1:75744752-75744590 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 222-390 |
| Cow position: | chr1:3661162-3661333 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 223-371 |
| Cow position: | chr1:42887374-42887521 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 228-503 |
| Cow position: | chr1:86364642-86364360 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 230-498 |
| Cow position: | chr1:66828545-66828272 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 106 |
| Conread position: | 236-374 |
| Cow position: | chr1:41092989-41093131 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 237-383 |
| Cow position: | chr1:76170160-76170011 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 242-516 |
| Cow position: | chr1:31123001-31123269 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 232, 91 |
| Conread position: | 246-502 |
| Cow position: | chr1:98023526-98023793 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 249-503 |
| Cow position: | chr1:22388337-22388599 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 255-501 |
| Cow position: | chr1:10881678-10881412 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 256-528 |
| Cow position: | chr1:7202387-7202123 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 261-511 |
| Cow position: | chr1:15956591-15956323 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 262 |
| Conread position: | 275-401 |
| Cow position: | chr1:79915081-79914956 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 276-480 |
| Cow position: | chr1:93810278-93810068 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 279-499 |
| Cow position: | chr1:6166086-6165862 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 312-497 |
| Cow position: | chr1:32072264-32072468 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 334-503 |
| Cow position: | chr1:98348760-98348942 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 343-501 |
| Cow position: | chr1:30665104-30664944 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 60 |
Show alignments to all cow chromosomes.