Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               16-359
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               56-397
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 133
               

               Conread position:
               85-359
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               97-375
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               128-369
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               133-358
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               133-390
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               133-501
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 209
               

               Conread position:
               137-502
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               138-503
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 200
               

               Conread position:
               143-350
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-341
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               155-347
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 5
               

               Conread position:
               155-351
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               155-352
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               155-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 189
               

               Conread position:
               155-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               155-367
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               155-369
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               155-373
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-375
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               155-383
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               155-395
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               155-399
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               155-512
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               156-359
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               156-359
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-367
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               162-367
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               162-415
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               167-411
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               167-497
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               169-366
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               183-367
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               184-399
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               186-359
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               186-390
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               187-359
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               187-375
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               188-369
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               188-437
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               190-502
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               168, 18
               

               Conread position:
               191-359
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               195-375
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               197-359
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               201-359
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               202-383
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               202-502
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               203-367
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-372
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-389
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               133, 23
               

               Conread position:
               203-502
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               204-359
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               204-404
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               204-487
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               208-359
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               208-371
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 158
               

               Conread position:
               208-456
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               208-485
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 172
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               211-401
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               217-356
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               217-359
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               217-359
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               217-387
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               218-472
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               220-357
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               220-370
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               221-371
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               221-383
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               221-407
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               221-502
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               253, 32
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               222-371
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               222-502
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               44, 130
               

               Conread position:
               225-424
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               228-375
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               228-503
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               235-373
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               236-391
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               237-395
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               251-503
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 151
               

               Conread position:
               253-393
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               254-393
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               255-502
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               261-503
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               319-454
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               341-525
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 185
               
Show alignments to all cow chromosomes.