Cow genome map

Conread name: Lym1-jns23_A07.f

Conread position: 1-336
Cow position: chr13:18535448-18535091 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 56

Conread position: 1-359
Cow position: chr13:3479617-3479985 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 56

Conread position: 1-372
Cow position: chr13:21256475-21256102 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 46

Conread position: 16-359
Cow position: chr13:40543546-40543882 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 37

Conread position: 56-397
Cow position: chr13:21694625-21694284 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 133

Conread position: 85-359
Cow position: chr13:57028381-57028093 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 97-375
Cow position: chr13:34995355-34995072 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 60

Conread position: 128-369
Cow position: chr13:45497255-45497015 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 67

Conread position: 133-358
Cow position: chr13:60487453-60487219 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 9

Conread position: 133-390
Cow position: chr13:1959019-1959278 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 89

Conread position: 133-501
Cow position: chr13:57746093-57745728 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 209

Conread position: 137-502
Cow position: chr13:35659766-35660144 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 138-503
Cow position: chr13:1839394-1839765 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 200

Conread position: 143-350
Cow position: chr13:46458641-46458851 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 155-341
Cow position: chr13:35654061-35653872 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 86

Conread position: 155-347
Cow position: chr13:17346836-17347034 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 5

Conread position: 155-351
Cow position: chr13:50823520-50823326 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 26

Conread position: 155-352
Cow position: chr13:11768011-11767810 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 155-359
Cow position: chr13:24539522-24539733 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 189

Conread position: 155-359
Cow position: chr13:30510090-30510299 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 66

Conread position: 155-367
Cow position: chr13:9125698-9125919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 158

Conread position: 155-369
Cow position: chr13:32717843-32717623 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 73

Conread position: 155-373
Cow position: chr13:6945398-6945625 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 155-375
Cow position: chr13:46501332-46501558 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 155-383
Cow position: chr13:18350871-18351102 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 87

Conread position: 155-395
Cow position: chr13:7262423-7262668 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 87

Conread position: 155-399
Cow position: chr13:24280278-24280526 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 21

Conread position: 155-512
Cow position: chr13:16343717-16344071 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 88

Conread position: 156-359
Cow position: chr13:47863668-47863461 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 33

Conread position: 156-359
Cow position: chr13:48037653-48037858 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 156-367
Cow position: chr13:1766802-1767013 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 79

Conread position: 162-367
Cow position: chr13:18243908-18244102 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 162-415
Cow position: chr13:22277126-22276878 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 105, 19

Conread position: 167-411
Cow position: chr13:52879455-52879699 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 37

Conread position: 167-497
Cow position: chr13:4604336-4604665 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 48

Conread position: 169-366
Cow position: chr13:54331064-54331264 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 51

Conread position: 183-367
Cow position: chr13:41608303-41608126 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 184-399
Cow position: chr13:6621537-6621320 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 86, 20

Conread position: 186-359
Cow position: chr13:41359813-41359987 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 186-390
Cow position: chr13:52284874-52285084 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 17

Conread position: 187-359
Cow position: chr13:20834790-20834619 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 14

Conread position: 187-375
Cow position: chr13:11290754-11290566 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 13

Conread position: 188-369
Cow position: chr13:38278071-38277889 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 54

Conread position: 188-437
Cow position: chr13:9246786-9247030 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 24

Conread position: 190-502
Cow position: chr13:9570060-9570376 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 168, 18

Conread position: 191-359
Cow position: chr13:47591078-47590903 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 37

Conread position: 195-375
Cow position: chr13:43384563-43384384 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 13

Conread position: 197-359
Cow position: chr13:46984473-46984633 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 31

Conread position: 201-359
Cow position: chr13:32316749-32316908 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 202-383
Cow position: chr13:14104763-14104582 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 134

Conread position: 202-502
Cow position: chr13:5619423-5619718 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 92

Conread position: 203-367
Cow position: chr13:37517053-37516890 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 17

Conread position: 203-372
Cow position: chr13:21275938-21276106 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 17

Conread position: 203-389
Cow position: chr13:15974696-15974878 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 23

Conread position: 203-502
Cow position: chr13:14063438-14063139 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 74, 16

Conread position: 204-359
Cow position: chr13:55843564-55843722 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 204-404
Cow position: chr13:46637049-46636846 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 23

Conread position: 204-487
Cow position: chr13:25926875-25927154 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 22

Conread position: 208-359
Cow position: chr13:62019008-62018854 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 18

Conread position: 208-371
Cow position: chr13:37069434-37069599 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 158

Conread position: 208-456
Cow position: chr13:25261726-25261480 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 159

Conread position: 208-485
Cow position: chr13:33517838-33517566 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 172

Conread position: 208-503
Cow position: chr13:16243311-16243597 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 12

Conread position: 211-401
Cow position: chr13:15850075-15850273 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 217-356
Cow position: chr13:60221340-60221199 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 11

Conread position: 217-359
Cow position: chr13:7010560-7010707 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 217-359
Cow position: chr13:17981888-17982027 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 217-387
Cow position: chr13:43848876-43849046 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 60, 145

Conread position: 218-472
Cow position: chr13:24822670-24822422 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 58, 50

Conread position: 220-357
Cow position: chr13:19451632-19451492 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 119

Conread position: 220-370
Cow position: chr13:47852125-47852281 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 221-371
Cow position: chr13:35853254-35853100 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 120

Conread position: 221-383
Cow position: chr13:29671340-29671179 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 115

Conread position: 221-407
Cow position: chr13:30674046-30673858 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 27

Conread position: 221-502
Cow position: chr13:16014914-16015174 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 253, 32

Conread position: 221-503
Cow position: chr13:11316462-11316188 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 121

Conread position: 222-371
Cow position: chr13:15172311-15172157 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 222-502
Cow position: chr13:45023112-45022826 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 130

Conread position: 225-424
Cow position: chr13:24238367-24238171 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 42

Conread position: 228-375
Cow position: chr13:33218307-33218451 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 106

Conread position: 228-503
Cow position: chr13:60966873-60967156 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 49

Conread position: 235-373
Cow position: chr13:57494070-57493932 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 81

Conread position: 236-391
Cow position: chr13:53012272-53012117 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 126

Conread position: 237-395
Cow position: chr13:15731376-15731536 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 101

Conread position: 251-503
Cow position: chr13:15945625-15945879 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 151

Conread position: 253-393
Cow position: chr13:30693832-30693973 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 254-393
Cow position: chr13:26255538-26255681 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 85

Conread position: 255-502
Cow position: chr13:48251859-48251620 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 159

Conread position: 261-503
Cow position: chr13:23856355-23856598 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 49

Conread position: 319-454
Cow position: chr13:47188891-47189026 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 17

Conread position: 341-525
Cow position: chr13:7297134-7297327 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 185

Show alignments to all cow chromosomes.